RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TXNDC9O14530 226 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 KLK8O60259 260 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CNOT3O75175 753 aaKnown RBP13.78□□□□□ -0.2
COMMD4-225ENST00000569245 MTHFD2P13995 350 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 TAC1P20366 129 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CCND1P24385 295 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 ATP5F1P24539 256 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-225ENST00000569245 ALDH3A1P30838 453 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 PRKAA2P54646 552 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 AP1S2P56377 157 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 GUCY1A3Q02108 690 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 OCA2Q04671 838 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 PDK4Q16654 411 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 PPP1R3AQ16821 1122 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 HKDC1Q2TB90 917 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CAPN13Q6MZZ7 669 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-225ENST00000569245 PRMT9Q6P2P2 845 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 C17orf64Q86WR6 236 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 NUDCD3Q8IVD9 361 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 DYDC1Q8WWB3 177 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CKAP2Q8WWK9 683 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 ATL1Q8WXF7 558 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CCDC126Q96EE4 140 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 FER1L6-AS2Q96M78 137 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 OR2A5Q96R48 311 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 TRIM4Q9C037 500 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CCDC134Q9H6E4 229 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 SOX17Q9H6I2 414 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-225ENST00000569245 WDR54Q9H977 334 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 ENAMQ9NRM1 1142 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 TMEM184CQ9NVA4 438 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 OXSMQ9NWU1 459 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 NUDT4Q9NZJ9 180 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CTSFQ9UBX1 484 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 CDC14AQ9UNH5 594 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 RUVBL1Q9Y265 456 aaKnown RBP13.78□□□□□ -0.2
COMMD4-225ENST00000569245 OARD1Q9Y530 152 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 BAHCC1Q9P281 2608 aa13.78□□□□□ -0.2
COMMD4-225ENST00000569245 DLX3O60479 287 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 SMIM24O75264 130 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 MED26O95402 600 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 ONECUT2O95948 504 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 IGHEP01854 428 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 STATHP02808 62 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 UMODP07911 640 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 ANXA5P08758 320 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 FBLP22087 321 aaKnown RBP13.77□□□□□ -0.21
COMMD4-225ENST00000569245 GRK3P35626 688 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 EMP3P54852 163 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 DNAJB13P59910 316 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 RPS15AP62244 130 aaKnown RBP13.77□□□□□ -0.21
COMMD4-225ENST00000569245 CDKL1Q00532 357 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 RELAQ04206 551 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 KLRB1Q12918 225 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 RAPSNQ13702 412 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 TGFBIQ15582 683 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 NKG7Q16617 165 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 PRTGQ2VWP7 1150 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 COLEC12Q5KU26 742 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 CDKL4Q5MAI5 379 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 RGS9BPQ6ZS82 235 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 COX15Q7KZN9 410 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 GPSM1Q86YR5 675 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 SLC22A9Q8IVM8 553 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 C10orf107Q8IVU9 208 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 TRIM42Q8IWZ5 723 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 PRSS58Q8IYP2 241 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 CLEC1AQ8NC01 280 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 PYCR2Q96C36 320 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 C10orf90Q96M02 699 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 MAGEB18Q96M61 343 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 CAPS2Q9BXY5 557 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 HELZ2Q9BYK8 2649 aaKnown RBP13.77□□□□□ -0.21
COMMD4-225ENST00000569245 P4HTMQ9NXG6 502 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 ZNF282Q9UDV7 671 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-225ENST00000569245 ANAPC2Q9UJX6 822 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 ADAM21Q9UKJ8 722 aa13.77□□□□□ -0.21
COMMD4-225ENST00000569245 NXT1Q9UKK6 140 aaKnown RBP13.77□□□□□ -0.21
COMMD4-225ENST00000569245 SEC16AO15027 2179 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 BSNQ9UPA5 3926 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 WDR91A4D1P6 747 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 A8MT66 165 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 UBXN8O00124 270 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 KLF11O14901 512 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 TRIM13O60858 407 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
COMMD4-225ENST00000569245 CDH1P12830 882 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 NPPBP16860 134 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 ASPHQ12797 758 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 NDUFA9Q16795 377 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 GARNL3Q5VVW2 1013 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 LIPMQ5VYY2 423 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 LCTLQ6UWM7 567 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 FRA10AC1Q70Z53 315 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 PPP1R32Q7Z5V6 425 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 TMEM151BQ8IW70 566 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 PDPRQ8NCN5 879 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms