RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZNF10P21506 573 aaPredicted RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 TSPAN7P41732 249 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 HTR6P50406 440 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 RAP1GDS1P52306 607 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 PDX1P52945 283 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ARSFP54793 590 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 RAB15P59190 212 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 MC2RQ01718 297 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 BTKQ06187 659 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 TARDBPQ13148 414 aaKnown RBP eCLIP7.43□□□□□ -1.22
CDH1-208ENST00000565810 CUL3Q13618 768 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 IL11RAQ14626 422 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 PUM1Q14671 1186 aaKnown RBP eCLIP7.43□□□□□ -1.22
CDH1-208ENST00000565810 ABRAXAS2Q15018 415 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 HERC3Q15034 1050 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 NR6A1Q15406 480 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 GPR19Q15760 415 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 MUM1Q2TAK8 710 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 UGT3A2Q3SY77 523 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ATP6AP1LQ52LC2 224 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 SPDYAQ5MJ70 313 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 DEPDC1Q5TB30 811 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 TMEM164Q5U3C3 297 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 YOD1Q5VVQ6 348 aaPredicted RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 GARNL3Q5VVW2 1013 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 FRMPD2BQ6IN97 320 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 NIPAL1Q6NVV3 410 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 TRIM40Q6P9F5 258 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 CEACAM20Q6UY09 585 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ATG14Q6ZNE5 492 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ACAD11Q709F0 780 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ABHD13Q7L211 337 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 PAGE2Q7Z2X7 111 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 TRIM46Q7Z4K8 759 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 VN1R4Q7Z5H5 301 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 PPP1R3BQ86XI6 285 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 OR4N4Q8N0Y3 316 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 WDR36Q8NI36 951 aaKnown RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 NT5CQ8TCD5 201 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 CREB3L4Q8TEY5 395 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 RGMAQ96B86 450 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 TUBGCP3Q96CW5 907 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 TM4SF19Q96DZ7 209 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 PPP3R2Q96LZ3 170 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 QRFPRQ96P65 431 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ZNF317Q96PQ6 595 aaPredicted RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 HBEGFQ99075 208 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ZPBPQ9BS86 351 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 NDC1Q9BTX1 674 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 MS4A8Q9BY19 250 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 SPRTNQ9H040 489 aaPredicted RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 FAM107BQ9H098 131 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 EPN3Q9H201 632 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 OR51B5Q9H339 312 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 TNFRSF12AQ9NP84 129 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 FBXO8Q9NRD0 319 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 FARSBQ9NSD9 589 aaKnown RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 FGFR1OP2Q9NVK5 253 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 OCIAD1Q9NX40 245 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 SLC39A1Q9NY26 324 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 DLL3Q9NYJ7 618 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 ASCC3Q8N3C0 2202 aaKnown RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 COL5A1P20908 1838 aaPredicted RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 A0A0G2JND7 137 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 ARHGAP10A1A4S6 786 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 HYKKA2RU49 373 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 PLD2O14939 933 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 ERI3O43414 337 aaKnown RBP7.42□□□□□ -1.22
CDH1-208ENST00000565810 DIAPH2O60879 1101 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 SH3BGRLO75368 114 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 STATHP02808 62 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 FGF5P12034 268 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 AVPR1BP47901 424 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 GABRA4P48169 554 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 ARFIP2P53365 341 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 ARFIP1P53367 373 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 MAPK10P53779 464 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 SEC24CP53992 1094 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 EMP3P54852 163 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 AQP5P55064 265 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 CLDN6P56747 220 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 HMGCS1Q01581 520 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 ACSM2AQ08AH3 577 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 HKDC1Q2TB90 917 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 AP5B1Q2VPB7 878 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 SPIN4Q56A73 249 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 TOR1AIP1Q5JTV8 583 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 DCAF12Q5T6F0 453 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 KHDRBS2Q5VWX1 349 aaKnown RBP7.42□□□□□ -1.22
CDH1-208ENST00000565810 ACSM2BQ68CK6 577 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 NXNQ6DKJ4 435 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 TMPRSS7Q7RTY8 843 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 VN1R5Q7Z5H4 357 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 TMEM126BQ8IUX1 230 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 PARP9Q8IXQ6 854 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 RNF175Q8N4F7 328 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 OR2L5Q8NG80 312 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 OR1L3Q8NH93 324 aa7.42□□□□□ -1.22
CDH1-208ENST00000565810 GAL3ST3Q96A11 431 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms