RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 COPG1Q9Y678 874 aaKnown RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SDK2Q58EX2 2172 aa9.46□□□□□ -0.89
PSEN1-213ENST00000555386 A0A1W2PPV9 198 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 MAGEA13PA6NCF6 341 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 ZNF839A8K0R7 811 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 C1QTNF9BB2RNN3 333 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 E7ENX8 843 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 AIM2O14862 343 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 NRP2O60462 931 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 PDE5AO76074 875 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 ZBTB11O95625 1053 aaPredicted RBP9.46□□□□□ -0.9
PSEN1-213ENST00000555386 BAG2O95816 211 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 S100BP04271 92 aaPredicted RBP9.46□□□□□ -0.9
PSEN1-213ENST00000555386 FGF4P08620 206 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 C1QTNF9P0C862 333 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 FOLR1P15328 257 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 MAGP20916 626 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 ATP6V0D1P61421 351 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 TBPL1P62380 186 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 TAP2Q03519 686 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 ART3Q13508 389 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 PIGGQ5H8A4 983 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 ZNF678Q5SXM1 525 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 PRSS42Q7Z5A4 293 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 HPS6Q86YV9 775 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 RASGRP3Q8IV61 690 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 C19orf47Q8N9M1 422 aaKnown RBP9.46□□□□□ -0.9
PSEN1-213ENST00000555386 FLVCR1-AS1Q8TAF5 88 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 ESAMQ96AP7 390 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 SLC22A18Q96BI1 424 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 NXPE2Q96DL1 559 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 TRAPPC9Q96Q05 1148 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 CD180Q99467 661 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 MRPL1Q9BYD6 325 aaKnown RBP9.46□□□□□ -0.9
PSEN1-213ENST00000555386 SHCBP1LQ9BZQ2 653 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 RAB33BQ9H082 229 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 WDR41Q9HAD4 459 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 PRM3Q9NNZ6 103 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 MRPS30Q9NP92 439 aaKnown RBP9.46□□□□□ -0.9
PSEN1-213ENST00000555386 CCDC177Q9NQR7 707 aaPredicted RBP9.46□□□□□ -0.9
PSEN1-213ENST00000555386 C1GALT1Q9NS00 363 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 WWOXQ9NZC7 414 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 PDP2Q9P2J9 529 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 TMCO1Q9UM00 188 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 TRAF6Q9Y4K3 522 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 OARD1Q9Y530 152 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 PCDHB11Q9Y5F2 797 aa9.46□□□□□ -0.9
PSEN1-213ENST00000555386 ACACBO00763 2458 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 SCN3AQ9NY46 2000 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 LAMA5O15230 3695 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CCDC88CQ9P219 2028 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 UBDO15205 165 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 JUNP05412 331 aaKnown RBP9.45□□□□□ -0.9
PSEN1-213ENST00000555386 ANXA5P08758 320 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 ENO2P09104 434 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-213ENST00000555386 NELFEP18615 380 aaKnown RBP9.45□□□□□ -0.9
PSEN1-213ENST00000555386 ME2P23368 584 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CMPK1P30085 196 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 HSD17B2P37059 387 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 GDF5P43026 501 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 KCNC1P48547 511 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 HSPA7P48741 367 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 AP1S2P56377 157 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 HSD11B2P80365 405 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CDC16Q13042 620 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 ARHGAP19Q14CB8 494 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 TGFBIQ15582 683 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 ZIC1Q15915 447 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 PPP1R3AQ16821 1122 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 SLC5A12Q1EHB4 618 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 TMTC4Q5T4D3 741 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 PRAMEF13Q5VWM6 474 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 FIGLAQ6QHK4 219 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 IZUMO2Q6UXV1 221 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 HACD2Q6Y1H2 254 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 PLD3Q8IV08 490 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 KBTBD2Q8IY47 623 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CLYBLQ8N0X4 340 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CACTIN-AS1Q8N1I8 211 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 FBXO15Q8NCQ5 510 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-213ENST00000555386 OR2L3Q8NG85 312 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 STAG3L4Q8TBR4 150 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 KLHL6Q8WZ60 621 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 KIAA1191Q96A73 305 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 FBXL8Q96CD0 374 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CCDC124Q96CT7 223 aaKnown RBP9.45□□□□□ -0.9
PSEN1-213ENST00000555386 RCN3Q96D15 328 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 MOCOSQ96EN8 888 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 FCRL4Q96PJ5 515 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CDRT15Q96T59 188 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 DPH7Q9BTV6 452 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 SLC25A23Q9BV35 468 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 KLHL4Q9C0H6 718 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 FAM60AQ9NP50 221 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 PDE7BQ9NP56 450 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 PLSCR2Q9NRY7 297 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 CUEDC1Q9NWM3 386 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-213ENST00000555386 SCOCQ9UIL1 159 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 SH2B3Q9UQQ2 575 aa9.45□□□□□ -0.9
PSEN1-213ENST00000555386 B3GALT1Q9Y5Z6 326 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms