RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ARHGAP15Q53QZ3 475 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 MANEALQ5VSG8 457 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 PRAMEF9Q5VWM5 478 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ANKS6Q68DC2 871 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ANKRD26P1Q6NSI1 321 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 METTL23Q86XA0 190 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 UMODL1-AS1Q8N2C9 162 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 NKAPQ8N5F7 415 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 NPWQ8N729 165 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 RTL3Q8N8U3 475 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 GLB1L3Q8NCI6 653 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 IPMKQ8NFU5 416 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 HMGCLL1Q8TB92 370 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 BPIFB1Q8TDL5 484 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CHAC2Q8WUX2 184 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 TWIST2Q8WVJ9 160 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 FCGR1BQ92637 280 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 KIAA1191Q96A73 305 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 TMEM125Q96AQ2 219 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 TBC1D20Q96BZ9 403 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 HSPBAP1Q96EW2 488 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 IMP4Q96G21 291 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 BTN2A3PQ96KV6 586 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CEP295NLQ96MC4 621 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF641Q96N77 438 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ZMAT2Q96NC0 199 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ZBTB18Q99592 522 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CGREF1Q99674 301 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 C19orf43Q9BQ61 176 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 MROQ9BYG7 248 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 ULBP1Q9BZM6 244 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 DERL2Q9GZP9 239 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 NACA2Q9H009 215 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CXCL16Q9H2A7 254 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 GORASP2Q9H8Y8 452 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 MOV10Q9HCE1 1003 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CPNE5Q9HCH3 593 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 AIG1Q9NVV5 245 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 C2orf42Q9NWW7 574 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 IFT80Q9P2H3 777 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 DNAJB9Q9UBS3 223 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 OAZ3Q9UMX2 235 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
VPS33B-203ENST00000554264 SH3BP1Q9Y3L3 701 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 NAALAD2Q9Y3Q0 740 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 MFHAS1Q9Y4C4 1052 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 YIPF1Q9Y548 306 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 A3GALT2U3KPV4 340 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CROCCQ5TZA2 2017 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 GREB1Q4ZG55 1949 aa5.74□□□□□ -1.49
VPS33B-203ENST00000554264 CNOT1A5YKK6 2376 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 hCG_2014768A0A024R1R8 64 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 YJEFN3A6XGL0 299 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TMEM233B4DJY2 109 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 M0QX08 132 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 DLGAP1O14490 977 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 EI24O14681 340 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ACOX3O15254 700 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 CD3EAPO15446 510 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 IRAK2O43187 625 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 KLK8O60259 260 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 SNX2O60749 519 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RECQL5O94762 991 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 SCELO95171 688 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ZBTB11O95625 1053 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 UGT2B4P06133 528 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 FYNP06241 537 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ANXA6P08133 673 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ODC1P11926 461 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 HGFP14210 728 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 HNRNPLP14866 589 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 CD1DP15813 335 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 CKMT2P17540 419 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TPH1P17752 444 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 EEF1B2P24534 225 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 IL12AP29459 219 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RYKP34925 604 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 AVPR1AP37288 418 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RXRGP48443 463 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PXNP49023 591 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TMED10P49755 219 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 GSK3BP49841 420 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 POLR2JP52435 117 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ARSFP54793 590 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TPD52P55327 224 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 WNT3AP56704 352 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RPS3AP61247 264 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TUBA1BP68363 451 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PHC1P78364 1004 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 LIPEQ05469 1076 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RAD51Q06609 339 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RIPPLY1Q0D2K3 151 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RALGDSQ12967 914 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 CTBP1Q13363 440 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PMS2P3Q13401 168 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PCOLCEQ15113 449 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TGFBIQ15582 683 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 DGUOKQ16854 277 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RNF151Q2KHN1 245 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 FBXO43Q4G163 708 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms