RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 HERC3Q15034 1050 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 PRAMEF9Q5VWM5 478 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 NIPAL1Q6NVV3 410 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 SH2D5Q6ZV89 423 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 OVCH1Q7RTY7 1134 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 GOLGA7Q7Z5G4 137 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 CYP4X1Q8N118 509 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 TMEM151AQ8N4L1 468 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 TEX9Q8N6V9 391 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 AMER3Q8N944 861 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 KCT2Q8NC54 265 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 ZCCHC10Q8TBK6 192 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 ADAMTS17Q8TE56 1095 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 TTC9Q92623 222 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 TMEM109Q9BVC6 243 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 SLC6A16Q9GZN6 736 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 C14orf105Q9NVL8 296 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 MKS1Q9NXB0 559 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 DCDC2Q9UHG0 476 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 PCTPQ9UKL6 214 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 POLHQ9Y253 713 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 PLAAQ9Y263 795 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 MRPS2Q9Y399 296 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 MAP4K5Q9Y4K4 846 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 ANGPTL3Q9Y5C1 460 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 SLC22A7Q9Y694 548 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 MAU2Q9Y6X3 613 aa11.13□□□□□ -0.63
TRAFD1-209ENST00000552896 A0A0A6YYC8 382 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 A0A1W2PPM1 405 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 CDC14CA4D256 554 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 CCDC151A5D8V7 595 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 URADA6NGE7 173 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 LRRC14BA6NHZ5 514 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 I3L1I5 382 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 CLEC3AO75596 197 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 WFS1O76024 890 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 SIX3O95343 332 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 IL1RNP18510 177 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 TAC1P20366 129 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 HPDP32754 393 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 HNF4AP41235 474 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 OR1D4P47884 311 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 AVPR1BP47901 424 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 CYP4F2P78329 520 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 GTF2H2Q13888 395 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 COL9A2Q14055 689 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 ERV3-1Q14264 604 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 RBBP5Q15291 538 aaKnown RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 NKG7Q16617 165 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 ATP1A1-AS1Q5TC04 95 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 MLIPQ5VWP3 458 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 GRHL2Q6ISB3 625 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 GTF2H2CQ6P1K8 395 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 ABHD13Q7L211 337 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 RAB43Q86YS6 212 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 AFAP1L2Q8N4X5 818 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 CREB3L4Q8TEY5 395 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 THAP4Q8WY91 577 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 UBE2E3Q969T4 207 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 COL26A1Q96A83 441 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 PHF21BQ96EK2 531 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 MOCOSQ96EN8 888 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 MMABQ96EY8 250 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 UBL7Q96S82 380 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 SPSB2Q99619 263 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 MACROD1Q9BQ69 325 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 C1QTNF3Q9BXJ4 246 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 RHBGQ9H310 441 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 ANKHQ9HCJ1 492 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 MKKSQ9NPJ1 570 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 TMEM216Q9P0N5 145 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF282Q9UDV7 671 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 PTRH2Q9Y3E5 179 aaKnown RBP11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 COL6A6A6NMZ7 2263 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 CPAMD8Q8IZJ3 1885 aa11.12□□□□□ -0.63
TRAFD1-209ENST00000552896 ANKDD1BA6NHY2 528 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 VSTM2BA6NLU5 285 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ERLIN1O75477 346 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 KLHL18O94889 574 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 SERPIND1P05546 499 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 FURINP09958 794 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF888P0CJ79 500 aaPredicted RBP11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ALOX12P18054 663 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 KRT4P19013 534 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ATP5F1P24539 256 aaPredicted RBP11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 CRHR1P34998 444 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 STXBP1P61764 594 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 HERVK_113P63132 956 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 SNRPNP63162 240 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 OCA2Q04671 838 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 HYAL2Q12891 473 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 HIST2H2ACQ16777 129 aaPredicted RBP11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ADPRMQ3LIE5 342 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 CCDC153Q494R4 210 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 LIPJQ5W064 366 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 HIST2H2AA3Q6FI13 130 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 MED27Q6P2C8 311 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 BORAQ6PGQ7 559 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms