RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 UROC1Q96N76 676 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 PRR14Q9BWN1 585 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 CD244Q9BZW8 370 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 IL26Q9NPH9 171 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 PCM1Q15154 2024 aa14.15□□□□□ -0.14
HOXC11-202ENST00000546378 OR10H3O60404 316 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 PLOD3O60568 738 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 SCO1O75880 301 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 GALTP07902 379 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ANXA4P09525 319 aaPredicted RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 DGKAP23743 735 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 BMPR1AP36894 532 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 CLCN7P51798 805 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 CLEC12AQ5QGZ9 265 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 NPAS4Q8IUM7 802 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 PHF10Q8WUB8 498 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 C1GALT1C1Q96EU7 318 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 DIRAS2Q96HU8 199 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 CASD1Q96PB1 797 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 TRIM62Q9BVG3 475 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 SAGE1Q9NXZ1 904 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 SAMD4AQ9UPU9 718 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 TNPO3Q9Y5L0 923 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 AGAP5A6NIR3 686 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 FAM47E-STBD1D6RA91 191 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ALOX5P09917 674 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 DNAJA1P31689 397 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 SOX6P35712 828 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 RUNX1T1Q06455 604 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 TOP3AQ13472 1001 aaPredicted RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 COQ7Q99807 217 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 CAPN10Q9HC96 672 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ABCB8Q9NUT2 735 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 NUDT4Q9NZJ9 180 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 MUTYHQ9UIF7 546 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 MRPS7Q9Y2R9 242 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 GPR52Q9Y2T5 361 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ANKRD34BA5PLL1 514 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 M0QZQ0 153 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 RTCAO00442 366 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 WBP4O75554 376 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 RPLP0P05388 317 aaKnown RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ATP6V1E1P36543 226 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 DEFB103AP81534 67 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 DSC1Q08554 894 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 NFE2Q16621 373 aaPredicted RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ATAD3CQ5T2N8 411 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 AGAP7PQ5VUJ5 663 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 BBS7Q8IWZ6 715 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 GGHQ92820 318 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 SLC38A4Q969I6 547 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 MYO19Q96H55 970 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ZNF300Q96RE9 604 aaPredicted RBP14.14□□□□□ -0.15
HOXC11-202ENST00000546378 WBP1LQ9NX94 342 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 CLEC4EQ9ULY5 219 aa14.14□□□□□ -0.15
HOXC11-202ENST00000546378 ATG2BQ96BY7 2078 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 ANKDD1BA6NHY2 528 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 TEX46H3BTG2 121 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 STX16O14662 325 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PRRG1O14668 218 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 YY2O15391 372 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 IGLV3-25P01717 112 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PSKH1P11801 424 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PTGER3P43115 390 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 BDKRB1P46663 353 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 IFITM2Q01629 132 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 MLLT1Q03111 559 aaPredicted RBP14.13□□□□□ -0.15
HOXC11-202ENST00000546378 VMACQ2NL98 169 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 SMU1Q2TAY7 513 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PPP2R2DQ66LE6 453 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 NOXRED1Q6NXP6 359 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 AQP11Q8NBQ7 271 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 B3GNT7Q8NFL0 401 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 KCNJ9Q92806 393 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 FAM124BQ9H5Z6 455 aaPredicted RBP14.13□□□□□ -0.15
HOXC11-202ENST00000546378 TVP23BQ9NYZ1 205 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 DHRS7Q9Y394 339 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 TRIM64CA6NLI5 447 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 ANKRD28O15084 1053 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 NCR1O76036 304 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 ESR1P03372 595 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 HOXA9P31269 272 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 HNF1BP35680 557 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 SLC16A1P53985 500 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 SRP54P61011 504 aaKnown RBP14.13□□□□□ -0.15
HOXC11-202ENST00000546378 HOXC5Q00444 222 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 UGT8Q16880 541 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PDZK1Q5T2W1 519 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 ALG1LQ6GMV1 187 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 ASB18Q6ZVZ8 466 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 ADCK2Q7Z695 626 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 ALDH16A1Q8IZ83 802 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 SYT14Q8NB59 555 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 OR8J3Q8NGG0 315 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 SORCS1Q8WY21 1168 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PPP1R2P1Q96PQ5 205 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PSKH2Q96QS6 385 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 YTHDF1Q9BYJ9 559 aaKnown RBP14.13□□□□□ -0.15
HOXC11-202ENST00000546378 CDCP1Q9H5V8 836 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms