RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TMCO1Q9UM00 188 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 SH2B3Q9UQQ2 575 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 BTRCQ9Y297 605 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF281Q9Y2X9 895 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ASB1Q9Y576 335 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 ZZEF1O43149 2961 aa6.08□□□□□ -1.44
PRKDC-211ENST00000546304 CCDC187A0A096LP49 1063 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 IGKV1-8A0A0C4DH67 115 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 SLC9B1P1A6NJY1 282 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 A8MT66 165 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 A8MU76 341 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TARM1B6A8C7 271 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TMX2-CTNND1H3BSU7 103 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 STX16-NPEPL1H3BU86 382 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 AGPSO00116 658 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 AGRPO00253 132 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 STX16O14662 325 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 MAP2K7O14733 419 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 PRICKLE3O43900 615 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KLK8O60259 260 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 NRP2O60462 931 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 PLIN3O60664 434 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 SPAG7O75391 227 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CLEC3AO75596 197 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ZBTB11O95625 1053 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 SBK3P0C264 359 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ZGLP1P0C6A0 271 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CDH1P12830 882 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 JUPP14923 745 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CREB1P16220 341 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 NELFEP18615 380 aaKnown RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TAC1P20366 129 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CMPK1P30085 196 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CSTF2P33240 577 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CRHR1P34998 444 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 GGT5P36269 586 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KCNC1P48547 511 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CCT5P48643 541 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 HSPA7P48741 367 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 SEPHS1P49903 392 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 AGTR2P50052 363 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ABATP80404 500 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CDC16Q13042 620 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TARDBPQ13148 414 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 EIF3IQ13347 325 aaKnown RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 SF1Q15637 639 aaKnown RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 PDK4Q16654 411 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 PFKFB4Q16877 469 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 DEFB110Q30KQ9 67 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 C18orf21Q32NC0 220 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CCDC153Q494R4 210 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TNFAIP8L3Q5GJ75 292 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 C3orf38Q5JPI3 329 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KIAA1614Q5VZ46 1190 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 LCTLQ6UWM7 567 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 RAB11FIP2Q7L804 512 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ARHGAP22Q7Z5H3 698 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ADCK2Q7Z695 626 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TMPRSS11BQ86T26 416 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 THOC6Q86W42 341 aaKnown RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 C17orf64Q86WR6 236 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 FAM129CQ86XR2 697 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KMT5CQ86Y97 462 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CCDC63Q8NA47 563 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 RDH11Q8TC12 318 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KLHL6Q8WZ60 621 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TRAPPC9Q96Q05 1148 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TMEM237Q96Q45 408 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 OR4K3Q96R72 315 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 CMKLR1Q99788 373 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 HAUS8Q9BT25 410 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KLHL25Q9H0H3 589 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ACBD3Q9H3P7 528 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 TMBIM4Q9HC24 238 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 MRPS30Q9NP92 439 aaKnown RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 DNAJC11Q9NVH1 559 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF446Q9NWS9 450 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 AKAP7Q9P0M2 348 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 SEMA5BQ9P283 1151 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 ANKMY1Q9P2S6 941 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 OPTCQ9UBM4 332 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 DCDC2Q9UHG0 476 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 MID2Q9UJV3 735 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 PTBP2Q9UKA9 531 aaKnown RBP6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KLK13Q9UKR3 277 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 GRID1Q9ULK0 1009 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 LOXL2Q9Y4K0 774 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 PCDHGB7Q9Y5F8 929 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 KLK4Q9Y5K2 254 aa6.07□□□□□ -1.44
PRKDC-211ENST00000546304 A0A1W2PNU3 283 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PMS2P1A4D2B8 440 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 OR2A25A4D2G3 310 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 EFCAB7A8K855 629 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 E7EQ34 232 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 K7EPI3 171 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 E2F3O00716 465 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PLD2O14939 933 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TAPBPO15533 448 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PRPF4O43172 522 aaKnown RBP eCLIP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TYROBPO43914 113 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms