RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 NR4A1P22736 598 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 PPIBP23284 216 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 ITPKAP23677 461 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 EPHA2P29317 976 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 PCGF2P35227 344 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 KRT20P35900 424 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 UGT2B10P36537 528 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 HPCAL1P37235 193 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 CTSOP43234 321 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 CCR3P51677 355 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 DCDC1P59894 354 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 RPP38P78345 283 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 RAE1P78406 368 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 KCNJ10P78508 379 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 IFITM3Q01628 133 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SEMG2Q02383 582 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 TEKQ02763 1124 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 HSPA14Q0VDF9 509 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 NPRL3Q12980 569 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 CBX3Q13185 183 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 ATP1A4Q13733 1029 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 GTF2H3Q13889 308 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SCN5AQ14524 2016 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SMN1Q16637 294 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 CYP2A13Q16696 494 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 HIST2H2ACQ16777 129 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 DGUOKQ16854 277 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 GRHL2Q6ISB3 625 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 C22orf39Q6P5X5 142 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SERPINA13PQ6UXR4 307 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 VTCN1Q7Z7D3 282 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 TRIM74Q86UV6 250 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 TRIM73Q86UV7 250 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 FAM124AQ86V42 546 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 TMC8Q8IU68 726 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SYT12Q8IV01 421 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 CLECL1Q8IZS7 167 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC39A11Q8N1S5 342 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 TMCO5AQ8N6Q1 288 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 KIAA1958Q8N8K9 716 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 ZFP90Q8TF47 636 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 BHMTQ93088 406 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 PYCR2Q96C36 320 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 COQ8BQ96D53 544 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 ASIC4Q96FT7 647 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 HRASLS5Q96KN8 279 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 RHNO1Q9BSD3 238 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 EBPLQ9BY08 206 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 ASPSCR1Q9BZE9 553 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SLIRPQ9GZT3 109 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 CCDC90BQ9GZT6 254 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 BRD9Q9H8M2 597 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 REEP1Q9H902 201 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 TPT1P8Q9HAU6 139 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 BRF2Q9HAW0 419 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 KRT84Q9NSB2 600 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 FKBP14Q9NWM8 211 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 THUMPD1Q9NXG2 353 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SELENONQ9NZV5 590 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 NFKBIL1Q9UBC1 381 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 VPS29Q9UBQ0 182 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 AASSQ9UDR5 926 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 LSM7Q9UK45 103 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 MAPRE3Q9UPY8 281 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 BTBD3Q9Y2F9 522 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SAMHD1Q9Y3Z3 626 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 DENND4CQ5VZ89 1909 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 MICAL3Q7RTP6 2002 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 PLXNA2O75051 1894 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 A0A1W2PPC1 479 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 TSPAN11A1L157 253 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 GABRR3A8MPY1 467 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 A8MVJ9 347 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ARHGEF33A8MVX0 844 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 M0R3G1 203 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 NPC1O15118 1278 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 PCDHGA12O60330 932 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 MAN1A2O60476 641 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 FAM20BO75063 409 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 DIRAS1O95057 198 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 POP4O95707 220 aaKnown RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 ALOX5P09917 674 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 CTSAP10619 480 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 COX7A2P14406 83 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 TIMP2P16035 220 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 IDSP22304 550 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 HLA-FP30511 346 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 HNF4AP41235 474 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 HALP42357 657 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 MAGEA8P43361 318 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 ASMTP46597 345 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 RXRGP48443 463 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 SERPINB10P48595 397 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 STK19P49842 368 aaPredicted RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 RNF144AP50876 292 aaPredicted RBP5□□□□□ -1.61
ATPAF1-212ENST00000542495 MVDP53602 400 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 LIMK1P53667 647 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 VBP1P61758 197 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 NCS1P62166 190 aa5□□□□□ -1.61
ATPAF1-212ENST00000542495 IRF8Q02556 426 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms