RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 C9orf64Q5T6V5 341 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 TTC29Q8NA56 475 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF740Q8NDX6 193 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 OR9A1PQ8NGU1 263 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 WDR48Q8TAF3 677 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 WFIKKN2Q8TEU8 576 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 RAB2BQ8WUD1 216 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 CIDECQ96AQ7 238 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 ZCCHC2Q9C0B9 1178 aaKnown RBP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 SIRT5Q9NXA8 310 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 GMPPBQ9Y5P6 360 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 SOBPA7XYQ1 873 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 C1GALT1C1LP0DN25 315 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 LAIR1Q6GTX8 287 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 B3GNT8Q7Z7M8 397 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 FUNDC2Q9BWH2 189 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 KRT84Q9NSB2 600 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 SUV39H1O43463 412 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 POP7O75817 140 aaKnown RBP23.93■■□□□ 1.42
RAB40C-204ENST00000538492 OPN1SWP03999 348 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 ITGB7P26010 798 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 ITGA1P56199 1179 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 KCNJ10P78508 379 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 C12orf76Q8N812 135 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-204ENST00000538492 FBLIM1Q8WUP2 373 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 BADQ92934 168 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 MUL1Q969V5 352 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 IL17FQ96PD4 163 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 REEP4Q9H6H4 257 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 DMRT3Q9NQL9 472 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 GPATCH2Q9NW75 528 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 PLAGL1Q9UM63 463 aa23.93■■□□□ 1.42
RAB40C-204ENST00000538492 PCYT1BQ9Y5K3 369 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-204ENST00000538492 UNC80Q8N2C7 3258 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 RNASET2O00584 256 aaKnown RBP23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ETFAP13804 333 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ADRB3P13945 408 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 PCMT1P22061 227 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 TMED1Q13445 227 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ANKDD1AQ495B1 522 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 GALNT18Q6P9A2 607 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 FBXO15Q8NCQ5 510 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-204ENST00000538492 SETD9Q8NE22 299 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 C7orf34Q96L11 122 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 SGPP1Q9BX95 441 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ERVK-18Q9QC07 812 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ANTXRLA6NF34 631 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 HOXC11O43248 304 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-204ENST00000538492 GCM2O75603 506 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-204ENST00000538492 C6orf47O95873 294 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 CCDC159P0C7I6 412 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 TNFRSF1BP20333 461 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 HTR1BP28222 390 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 VASPP50552 380 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-204ENST00000538492 SMN1Q16637 294 aaKnown RBP23.92■■□□□ 1.42
RAB40C-204ENST00000538492 RTL10Q7L3V2 364 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 OR8D1Q8WZ84 308 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 RHNO1Q9BSD3 238 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 EFCAB11Q9BUY7 163 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 RUBCNLQ9H714 662 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ADPRHL2Q9NX46 363 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF282Q9UDV7 671 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-204ENST00000538492 ACSL6Q9UKU0 697 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 PSME2Q9UL46 239 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 CORO2BQ9UQ03 480 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 SLC27A6Q9Y2P4 619 aa23.92■■□□□ 1.42
RAB40C-204ENST00000538492 EMX1Q04741 257 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-204ENST00000538492 ELP6Q0PNE2 266 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 HNRNPA1L2Q32P51 320 aaKnown RBP23.91■■□□□ 1.42
RAB40C-204ENST00000538492 IQCCQ4KMZ1 466 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 CPA6Q8N4T0 437 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 FAM81AQ8TBF8 368 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 SP7Q8TDD2 431 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-204ENST00000538492 SLC5A11Q8WWX8 675 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 TRIM39Q9HCM9 518 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 GALNT8Q9NY28 637 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 TMEM98Q9Y2Y6 226 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 JRKO75564 520 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 BCL10O95999 233 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 PPIBP23284 216 aaKnown RBP23.91■■□□□ 1.42
RAB40C-204ENST00000538492 GP2P55259 537 aaKnown RBP23.91■■□□□ 1.42
RAB40C-204ENST00000538492 PAGE2BQ5JRK9 111 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 FAM83HQ6ZRV2 1179 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-204ENST00000538492 ETFBKMTQ8IXQ9 262 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 C11orf65Q8NCR3 313 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.91■■□□□ 1.429e-13■■■■■ 40.9
RAB40C-204ENST00000538492 UBE2FQ969M7 185 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 NRTNQ99748 197 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 ACAT2Q9BWD1 397 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 NAALAD2Q9Y3Q0 740 aa23.91■■□□□ 1.42
RAB40C-204ENST00000538492 TMEM229AB2RXF0 380 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 C2orf80Q0P641 193 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 KEAP1Q14145 624 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 HIST2H2ACQ16777 129 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 HIST2H2AA3Q6FI13 130 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 LAS2Q8IYD9 372 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 LRRC56Q8IYG6 542 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-204ENST00000538492 OR5AK3PQ8NH89 298 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 SPPL2AQ8TCT8 520 aa23.9■■□□□ 1.42
RAB40C-204ENST00000538492 FKBP10Q96AY3 582 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms