RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 CMTM5Q96DZ9 223 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 SLC45A3Q96JT2 553 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 TMEM74Q96NL1 305 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 FCRL4Q96PJ5 515 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 MAP3K3Q99759 626 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 MACROD1Q9BQ69 325 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 ZNF717Q9BY31 904 aaPredicted RBP11.2□□□□□ -0.62
SPARC-207ENST00000537849 KLHL25Q9H0H3 589 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 FAM60AQ9NP50 221 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 LHX9Q9NQ69 397 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 DNAAF2Q9NVR5 837 aaKnown RBP11.2□□□□□ -0.62
SPARC-207ENST00000537849 SEMA5BQ9P283 1151 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 BTBD3Q9Y2F9 522 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 PCDHGB2Q9Y5G2 931 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 DMDP11532 3685 aa11.2□□□□□ -0.62
SPARC-207ENST00000537849 SEC16AO15027 2179 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 LOC105369274A0A096LPK9 316 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 LOC102723532A0A0G2JNH3 316 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CPED1A4D0V7 1026 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 B2RBV5 119 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SAP18O00422 153 aaKnown RBP11.19□□□□□ -0.62
SPARC-207ENST00000537849 HCRTR1O43613 425 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SH3BP5O60239 455 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SLC22A3O75751 556 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 KIAA0754O94854 1291 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SEMA3DO95025 777 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 C9P02748 559 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SNRPB2P08579 225 aaKnown RBP11.19□□□□□ -0.62
SPARC-207ENST00000537849 SMIM10L1P0DMW3 83 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SDC1P18827 310 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CDH3P22223 829 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
SPARC-207ENST00000537849 GFERP55789 205 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CLDN8P56748 225 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 STX1BP61266 288 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 GPLD1P80108 840 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 ACSM2AQ08AH3 577 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CYLC2Q14093 348 aaPredicted RBP11.19□□□□□ -0.62
SPARC-207ENST00000537849 SPIN4Q56A73 249 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 PERM1Q5SV97 790 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CACHD1Q5VU97 1274 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 ACSM2BQ68CK6 577 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 IRGCQ6NXR0 463 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 GUSBP11Q6P575 273 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 RINLQ6ZS11 566 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 USP53Q70EK8 1073 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 RNF44Q7L0R7 432 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 COMMD6Q7Z4G1 85 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SNX32Q86XE0 403 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 RIMKLAQ8IXN7 391 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 OR4N4Q8N0Y3 316 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 FBXO27Q8NI29 283 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.19□□□□□ -0.62
SPARC-207ENST00000537849 NT5CQ8TCD5 201 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 TSPEARQ8WU66 669 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CCDC74AQ96AQ1 378 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 RGMAQ96B86 450 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 ZDHHC12Q96GR4 267 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SMIM10Q96HG1 83 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 EGLN2Q96KS0 407 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CD180Q99467 661 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 SLC6A16Q9GZN6 736 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CHRNA10Q9GZZ6 450 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 PRDM7Q9NQW5 492 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 TXLNGQ9NUQ3 528 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 TAS2R1Q9NYW7 299 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 AHSPQ9NZD4 102 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 CCDC167Q9P0B6 97 aa11.19□□□□□ -0.62
SPARC-207ENST00000537849 IGHV5-51A0A0C4DH38 117 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 A0A0J9YVX5 310 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 LNP1A1A4G5 178 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 FAM234BA2RU67 622 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 H0YGG7 62 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 FBP2O00757 339 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 PLPP1O14494 284 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 CDX4O14627 284 aaPredicted RBP11.18□□□□□ -0.62
SPARC-207ENST00000537849 NDUFS4O43181 175 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 MYO1DO94832 1006 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 STATHP02808 62 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 SERPIND1P05546 499 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 KLK1P06870 262 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 ANXA4P09525 319 aaPredicted RBP11.18□□□□□ -0.62
SPARC-207ENST00000537849 CKMT1AP12532 417 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 JAK1P23458 1154 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 MAPK1P28482 360 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 PTPN4P29074 926 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 TIA1P31483 386 aaKnown RBP eCLIP11.18□□□□□ -0.62
SPARC-207ENST00000537849 CPA2P48052 419 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 GABRA4P48169 554 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 POLR2JP52435 117 aaKnown RBP11.18□□□□□ -0.62
SPARC-207ENST00000537849 ARF3P61204 181 aaPredicted RBP11.18□□□□□ -0.62
SPARC-207ENST00000537849 CYP4F3Q08477 520 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 PWP1Q13610 501 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 PTGR1Q14914 329 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 SUZ12Q15022 739 aaKnown RBP11.18□□□□□ -0.62
SPARC-207ENST00000537849 TLR1Q15399 786 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 AMZ1Q400G9 498 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 TMEM35AQ53FP2 167 aa11.18□□□□□ -0.62
SPARC-207ENST00000537849 FRMPD2BQ6IN97 320 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms