RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 CDSNQ15517 529 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 LGSNQ5TDP6 509 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 FAAH2Q6GMR7 532 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 STRA8Q7Z7C7 330 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 CDH24Q86UP0 819 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 DENND6AQ8IWF6 608 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 OR2L3Q8NG85 312 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 MTFMTQ96DP5 389 aaKnown RBP17.1■□□□□ 0.33
SCN4B-205ENST00000531550 TTC1Q99614 292 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 SH3GL2Q99962 352 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 TSSK1BQ9BXA7 367 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 C14orf105Q9NVL8 296 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 INTS10Q9NVR2 710 aaKnown RBP17.1■□□□□ 0.33
SCN4B-205ENST00000531550 TXNDC16Q9P2K2 825 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 TRPC4Q9UBN4 977 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 LGALS13Q9UHV8 139 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 VPS9D1Q9Y2B5 631 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 PSAT1Q9Y617 370 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 MED13LQ71F56 2210 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 NF1P21359 2839 aa17.1■□□□□ 0.33
SCN4B-205ENST00000531550 IQCF5A8MTL0 148 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 CLDN14O95500 239 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 AHSGP02765 367 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 APOA4P06727 396 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 CAPN3P20807 821 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 GABRB3P28472 473 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
SCN4B-205ENST00000531550 DSG2Q14126 1118 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 SEMA3AQ14563 771 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 PCOLCEQ15113 449 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 PRTGQ2VWP7 1150 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 RNF187Q5TA31 235 aaPredicted RBP17.09■□□□□ 0.33
SCN4B-205ENST00000531550 ABHD17BQ5VST6 288 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 OTUD6BQ8N6M0 293 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 AMER2Q8N7J2 671 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 C14orf79Q96F83 325 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 PGM2Q96G03 612 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 CABS1Q96KC9 395 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 RBBP8Q99708 897 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 ZNF700Q9H0M5 742 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 RHOJQ9H4E5 214 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 TMBIM4Q9HC24 238 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 SLC17A6Q9P2U8 582 aa17.09■□□□□ 0.33
SCN4B-205ENST00000531550 CCDC168Q8NDH2 2452 aa17.08■□□□□ 0.33
SCN4B-205ENST00000531550 LOC102723996A0A087X1L8 192 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 KRT87PA6NCN2 255 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 GOLGA6L10A6NI86 522 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 HEXBP07686 556 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 MYZAPP0CAP1 466 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 KIR3DL1P43629 444 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 BDKRB1P46663 353 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 SLCO1A2P46721 670 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 AP2B1P63010 937 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 NEK10Q6ZWH5 1172 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 TAOK1Q7L7X3 1001 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 ZC3HC1Q86WB0 502 aaKnown RBP17.08■□□□□ 0.32
SCN4B-205ENST00000531550 KRT222Q8N1A0 295 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 HMGCLL1Q8TB92 370 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 ADAMTS18Q8TE60 1221 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 RAD51AP1Q96B01 352 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 MRRFQ96E11 262 aaKnown RBP17.08■□□□□ 0.32
SCN4B-205ENST00000531550 MAGED4Q96JG8 741 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 ZFYVE21Q9BQ24 234 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 YIPF2Q9BWQ6 316 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 CORO1CQ9ULV4 474 aaPredicted RBP17.08■□□□□ 0.32
SCN4B-205ENST00000531550 CDC14AQ9UNH5 594 aa17.08■□□□□ 0.32
SCN4B-205ENST00000531550 SETD2Q9BYW2 2564 aaPredicted RBP17.08■□□□□ 0.32
SCN4B-205ENST00000531550 IQANK1A0A1B0GTG1 560 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 A0A1W2PPV9 198 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 OR2A25A4D2G3 310 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 SMIM23A6NLE4 172 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 PRPF4O43172 522 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCN4B-205ENST00000531550 NDUFS3O75489 264 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 FAM155BO75949 473 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 HAUS5O94927 633 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 SNRPAP09012 282 aaKnown RBP17.07■□□□□ 0.32
SCN4B-205ENST00000531550 AOAHP28039 575 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 EMP3P54852 163 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 ADARP55265 1226 aaKnown RBP17.07■□□□□ 0.32
SCN4B-205ENST00000531550 MPP1Q00013 466 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 ZNF33BQ06732 778 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 TMED2Q15363 201 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 CCSMST1Q4G0I0 132 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 TNFAIP8L3Q5GJ75 292 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 ZNF766Q5HY98 468 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 TTC23LQ6PF05 361 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 LDB1Q86U70 411 aaPredicted RBP17.07■□□□□ 0.32
SCN4B-205ENST00000531550 CEP97Q8IW35 865 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 AMER3Q8N944 861 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 OR2A1Q8NGT9 310 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 MTBPQ96DY7 904 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 MVB12AQ96EY5 273 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 FBXO6Q9NRD1 293 aaPredicted RBP17.07■□□□□ 0.32
SCN4B-205ENST00000531550 ZNF835Q9Y2P0 537 aa17.07■□□□□ 0.32
SCN4B-205ENST00000531550 H0YGG7 62 aa17.06■□□□□ 0.32
SCN4B-205ENST00000531550 RGS16O15492 202 aaPredicted RBP17.06■□□□□ 0.32
SCN4B-205ENST00000531550 C1orf105O95561 183 aa17.06■□□□□ 0.32
SCN4B-205ENST00000531550 ICAM2P13598 275 aa17.06■□□□□ 0.32
SCN4B-205ENST00000531550 SLC26A3P40879 764 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms