RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 AGXTP21549 392 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MGAT1P26572 445 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 NMBRP28336 390 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 CASRP41180 1078 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 SLCO1A2P46721 670 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 GABRA4P48169 554 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MTTPP55157 894 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 PSMA6P60900 246 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 TUBA4AP68366 448 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 ABRQ12979 859 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 CDC16Q13042 620 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 GRB7Q14451 532 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 KCNJ11Q14654 390 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 TMED2Q15363 201 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 ATP1A1-AS1Q5TC04 95 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 ATG16L1Q676U5 607 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 KIAA0930Q6ICG6 404 aaPredicted RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 ZFP1Q6P2D0 407 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 NAPRTQ6XQN6 538 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 CDHR3Q6ZTQ4 885 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 DHDDSQ86SQ9 333 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 PATL1Q86TB9 770 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MTDHQ86UE4 582 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 CCDC25Q86WR0 208 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 DCUN1D3Q8IWE4 304 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 DNAJC22Q8N4W6 341 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 C19orf47Q8N9M1 422 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 SCAIQ8N9R8 606 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 ICA1LQ8NDH6 482 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 GSDMBQ8TAX9 411 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 HMGCLL1Q8TB92 370 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 ZUFSPQ96AP4 578 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 RAD51AP1Q96B01 352 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 EFHD2Q96C19 240 aaPredicted RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MPP4Q96JB8 637 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 DHRS4Q9BTZ2 278 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MENTQ9BUN1 341 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 UNKQ9C0B0 810 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 CHST8Q9H2A9 424 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 XAB2Q9HCS7 855 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 FAM60AQ9NP50 221 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MLXIPLQ9NP71 852 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MRGBPQ9NV56 204 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 SPHK1Q9NYA1 384 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 UBAP1Q9NZ09 502 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 NINJ2Q9NZG7 142 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 SPATA7Q9P0W8 599 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 MARCH4Q9P2E8 410 aaPredicted RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 CNOT11Q9UKZ1 510 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 SOX13Q9UN79 622 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 TDRKHQ9Y2W6 561 aaKnown RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 NEU2Q9Y3R4 380 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 SPTBP11277 2137 aa7.7□□□□□ -1.18
SCN1A-207ENST00000507401 UBR5O95071 2799 aaPredicted RBP7.7□□□□□ -1.18
SCN1A-207ENST00000507401 BSNQ9UPA5 3926 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 FAM237BA0A1B0GVD1 139 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 A0A1B0GVG6 124 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TCRBV7S3A2A0A539 114 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 IQCF5A8MTL0 148 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ISM1B1AKI9 464 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TARM1B6A8C7 271 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PRICKLE3O43900 615 aaPredicted RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TYROBPO43914 113 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 CCNT2O60583 730 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 RFPL1O75677 317 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 OR2B3O76000 313 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 KLHL2O95198 593 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ACSL3O95573 720 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ESR1P03372 595 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 CAPN1P07384 714 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PVRP15151 417 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PAMP19021 973 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 OGNP20774 298 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ARNTP27540 789 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PKLRP30613 574 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 CCNFP41002 786 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 NEK2P51955 445 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 CRADDP78560 199 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 KLRB1Q12918 225 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 GPS1Q13098 491 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 THOC5Q13769 683 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 MPP2Q14168 576 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 MORF4L2Q15014 288 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ZIC1Q15915 447 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TYSND1Q2T9J0 566 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ZC3H12BQ5HYM0 836 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 RHBDD2Q6NTF9 364 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 NEPROQ6NW34 567 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 FRA10AC1Q70Z53 315 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 OTOAQ7RTW8 1153 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 LDB1Q86U70 411 aaPredicted RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 TMEM135Q86UB9 458 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 CAND1Q86VP6 1230 aaKnown RBP7.69□□□□□ -1.18
SCN1A-207ENST00000507401 VRK3Q8IV63 474 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 SYTL1Q8IYJ3 562 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 RAB42Q8N4Z0 105 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 OR2L8Q8NGY9 312 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 PROKR1Q8TCW9 393 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 ADAMTS17Q8TE56 1095 aa7.69□□□□□ -1.18
SCN1A-207ENST00000507401 NRG4Q8WWG1 115 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms