RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 LRCH3Q96II8 777 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 GMCL1Q96IK5 515 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 PPP1R36Q96LQ0 422 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 KCNS3Q9BQ31 491 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 TREX2Q9BQ50 279 aaPredicted RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 H2AFJQ9BTM1 129 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 DPH7Q9BTV6 452 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 BBS2Q9BXC9 721 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 ASPNQ9BXN1 380 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 GABARAPL3Q9BY60 117 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 TINAGL1Q9GZM7 467 aaPredicted RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 XYLT2Q9H1B5 865 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 OR51E2Q9H255 320 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 TNKS2Q9H2K2 1166 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 ANKRD19PQ9H560 264 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 FAM124BQ9H5Z6 455 aaPredicted RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 OPA3Q9H6K4 179 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 ELAC1Q9H777 363 aaKnown RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 DDX31Q9H8H2 851 aaKnown RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 AKTIPQ9H8T0 292 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 SLC28A3Q9HAS3 691 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 NEUROD4Q9HD90 331 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 BRD7Q9NPI1 651 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 C11orf16Q9NQ32 467 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 ACSS2Q9NR19 701 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 TREM2Q9NZC2 230 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 MED11Q9P086 117 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 MYEF2Q9P2K5 600 aaKnown RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 MALT1Q9UDY8 824 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 POMT2Q9UKY4 750 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 RPH3AQ9Y2J0 694 aaPredicted RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 MSRB2Q9Y3D2 182 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 PCDHB7Q9Y5E2 793 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 PCDHGA9Q9Y5G4 932 aaKnown RBP5.78□□□□□ -1.48
LINC01340-201ENST00000504012 SLC22A7Q9Y694 548 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 STYXL1Q9Y6J8 313 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 FOCADQ5VW36 1801 aa5.78□□□□□ -1.48
LINC01340-201ENST00000504012 ARID2Q68CP9 1835 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 LOC100506127A0A0U1RQW1 187 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 RAB19A4D1S5 217 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 A8MVJ9 347 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 TMEM233B4DJY2 109 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 TEX46H3BTG2 121 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 DFFAO00273 331 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 NOBOXO60393 691 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 NDUFS6O75380 124 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 STX11O75558 287 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 ITGA10O75578 1167 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 EIF3GO75821 320 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 SC5DO75845 299 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 S1PR4O95977 384 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 POMCP01189 267 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 CRYABP02511 175 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 MT-ND1P03886 318 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 RLN2P04090 185 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 GLAP06280 429 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 NMBP08949 121 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 TSPAN19P0C672 248 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 ZDHHC11BP0C7U3 371 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 PIPP12273 146 aaPredicted RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 LCP1P13796 627 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 UGT2B7P16662 529 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 PTPRAP18433 802 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 FPR1P21462 350 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 ITPKAP23677 461 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 PTAFRP25105 342 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 SLC6A1P30531 599 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 YWHABP31946 246 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 SDC2P34741 201 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 ATP5C1P36542 298 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 RPS19P39019 145 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 CD86P42081 329 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 GYG1P46976 350 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 POU3F4P49335 361 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 NRLP54845 237 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 ITGA1P56199 1179 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 ARPP19P56211 112 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 CD81P60033 236 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 UBE2IP63279 158 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 RNF4P78317 190 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 DCDP81605 110 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 POU4F1Q01851 419 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 ACY1Q03154 408 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 IFRD2Q12894 506 aaPredicted RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 GPR17Q13304 367 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 PWP1Q13610 501 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 CAPRIN1Q14444 709 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 GRM3Q14832 879 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 OPCMLQ14982 345 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 TRAM2Q15035 370 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 PGM5Q15124 567 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 FCN2Q15485 313 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 TEAD4Q15561 434 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 FAM83EQ2M2I3 478 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 MPEG1Q2M385 716 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 SUPT20HL1Q3ZLR7 823 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 FLYWCH1Q4VC44 716 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 PAN3Q58A45 887 aaKnown RBP5.77□□□□□ -1.49
LINC01340-201ENST00000504012 RABL3Q5HYI8 236 aa5.77□□□□□ -1.49
LINC01340-201ENST00000504012 C3orf38Q5JPI3 329 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms