RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 AKR7A3O95154 331 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 LY86O95711 162 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 MT-CO1P00395 513 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CSRP1P21291 193 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 IGFBP5P24593 272 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 HNRNPH3P31942 346 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 RANBP2P49792 3224 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 UBE2G2P60604 165 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SOX4Q06945 474 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 KCNMA1Q12791 1236 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CDH17Q12864 832 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 LCP2Q13094 533 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 KRT81Q14533 505 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 GANABQ14697 944 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ZNF169Q14929 603 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 TRIM61Q5EBN2 209 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 RSBN1Q5VWQ0 802 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 WSCD1Q658N2 575 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 C18orf63Q68DL7 685 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 UGT3A1Q6NUS8 523 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 UGT2A3Q6UWM9 527 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 TIPARPQ7Z3E1 657 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 TRIM69Q86WT6 500 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ARMC8Q8IUR7 673 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 NUDCD3Q8IVD9 361 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ZNF679Q8IYX0 411 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 GPD1LQ8N335 351 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 RASGEF1CQ8N431 466 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 LRRC18Q8N456 261 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 C19orf18Q8NEA5 215 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 OR8K5Q8NH50 307 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 PDLIM5Q96HC4 596 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ZNF479Q96JC4 524 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ZBTB45Q96K62 511 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 MAP3K3Q99759 626 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 APOL2Q9BQE5 337 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 REEP2Q9BRK0 252 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 OSBPL8Q9BZF1 889 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.42□□□□□ -1.72e-22■■■□□ 19
RABGGTB-213ENST00000496055 GOLPH3Q9H4A6 298 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 FBXO34Q9NWN3 711 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CLEC2DQ9UHP7 191 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 GPN3Q9UHW5 284 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CAMK2AQ9UQM7 478 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 NCKAP1Q9Y2A7 1128 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SPACA6W5XKT8 324 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 KIAA1671Q9BY89 1806 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 RFPL4AA6NLU0 287 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 RFPL4AL1F8VTS6 287 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 TFECO14948 347 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 AURKAO14965 403 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SMAD7O15105 426 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 EDIL3O43854 480 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 DPM1O60762 260 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SLC43A1O75387 559 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 PSMG1O95456 288 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 GSRP00390 522 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CRHP06850 196 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 PTPN1P18031 435 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 GJB2P29033 226 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ACOT2P49753 483 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SF3A3Q12874 501 aaKnown RBP eCLIP4.42□□□□□ -1.75e-13■■■■■ 31.1
RABGGTB-213ENST00000496055 ILF2Q12905 390 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 COL9A3Q14050 684 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 FGL2Q14314 439 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CNN3Q15417 329 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 DDR2Q16832 855 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 PGS1Q32NB8 556 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 C2orf76Q3KRA6 126 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SEZ6Q53EL9 994 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 FAM91A1Q658Y4 838 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 TYW3Q6IPR3 259 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SHISA2Q6UWI4 295 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 IL20RBQ6UXL0 311 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SLC16A13Q7RTY0 426 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 PLCZ1Q86YW0 608 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CNGA4Q8IV77 575 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ZNF557Q8N988 423 aaPredicted RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 NETO2Q8NC67 525 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 NUDT10Q8NFP7 164 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 OR8J1Q8NGP2 316 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 RPLP0P6Q8NHW5 317 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 SH3RF2Q8TEC5 729 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 CHTF18Q8WVB6 975 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 ZHX1-C8orf76Q96EF9 292 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 HPDLQ96IR7 371 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 BTBD10Q9BSF8 475 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 BDH2Q9BUT1 245 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 PTDSS2Q9BVG9 487 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 IFT27Q9BW83 186 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 GTPBP2Q9BX10 602 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 PRDM7Q9NQW5 492 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 TLR8Q9NR97 1041 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 RBM12Q9NTZ6 932 aaKnown RBP4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 GTSE1Q9NYZ3 720 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 IFNKQ9P0W0 207 aa4.42□□□□□ -1.7
RABGGTB-213ENST00000496055 MYO10Q9HD67 2058 aa4.41□□□□□ -1.7
RABGGTB-213ENST00000496055 I3L521 148 aa4.41□□□□□ -1.7
RABGGTB-213ENST00000496055 STX16O14662 325 aa4.41□□□□□ -1.7
RABGGTB-213ENST00000496055 VNN2O95498 520 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms