RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RFXANKO14593 260 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 PRMT3O60678 531 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SCELO95171 688 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 ZBTB11O95625 1053 aaPredicted RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 C7P10643 843 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 IL1RL1Q01638 556 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 FCHO2Q0JRZ9 810 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 TSTA3Q13630 321 aaPredicted RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 NFE2L1Q14494 772 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 STK11Q15831 433 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 UGT8Q16880 541 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 DPY19L1Q2PZI1 675 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SLCO4C1Q6ZQN7 724 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 TMPRSS11BQ86T26 416 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 ZDHHC13Q8IUH4 622 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SNX19Q92543 992 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 NELL1Q92832 810 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 FAM162AQ96A26 154 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 RAB7BQ96AH8 199 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 UGT2B28Q9BY64 529 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 REXO4Q9GZR2 422 aaKnown RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 CCDC90BQ9GZT6 254 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 PRM3Q9NNZ6 103 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 KIF26AQ9ULI4 1882 aaPredicted RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 GPR34Q9UPC5 381 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 VEGFDO43915 354 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 KAT7O95251 611 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 ETHE1O95571 254 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 GZMMP51124 257 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SRSF11Q05519 484 aaKnown RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 NFATC3Q12968 1075 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 STARD3Q14849 445 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SHHQ15465 462 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SF1Q15637 639 aaKnown RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 EGFLAMQ63HQ2 1017 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 C10orf111Q8N326 155 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 PLA2G15Q8NCC3 412 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 OR9A1PQ8NGU1 263 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 OR2L2Q8NH16 312 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 HUS1BQ8NHY5 278 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SDCCAG3Q96C92 435 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 C11orf24Q96F05 449 aaPredicted RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 METTL2AQ96IZ6 378 aaKnown RBP13.26□□□□□ -0.29
VCP-207ENST00000493886 TBC1D23Q9NUY8 699 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 ZNF639Q9UID6 485 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 CORINQ9Y5Q5 1042 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 G3V2T6 193 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 TNFRSF10AO00220 468 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 HS6ST1O60243 411 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 SH3BGRLO75368 114 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 PRKD3O94806 890 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 MYO1DO94832 1006 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 PIP5KL1Q5T9C9 394 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 ANKRD26P1Q6NSI1 321 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 GALNT18Q6P9A2 607 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 ZNF773Q6PK81 442 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 LMNTD1Q8N9Z9 388 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 OR52E4Q8NGH9 312 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 CDC26Q8NHZ8 85 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 PLA2G2FQ9BZM2 168 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 DPEP2Q9H4A9 486 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 CDH7Q9ULB5 785 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 MGAT4DA6NG13 374 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 COX7A2P14406 83 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 NPPBP16860 134 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 CCNA2P20248 432 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 HNRNPFP52597 415 aaKnown RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 MLLT10P55197 1068 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 C21orf59P57076 290 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 MED27Q6P2C8 311 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 YAF2Q8IY57 180 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 C1orf52Q8N6N3 182 aaKnown RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 CHFRQ96EP1 664 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 SLC47A1Q96FL8 570 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 SGPP1Q9BX95 441 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 AMBRA1Q9C0C7 1298 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 LMAN2LQ9H0V9 348 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 ARMC7Q9H6L4 198 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 SH2B3Q9UQQ2 575 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 DYRK1BQ9Y463 629 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 PCYT1BQ9Y5K3 369 aaPredicted RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 CDH23Q9H251 3354 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 A0A0B4J203 849 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 CREG1O75629 220 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 ACADLP28330 430 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 BMXP51813 675 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 WNT3P56703 355 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 RAE1P78406 368 aaKnown RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 ABHD18Q0P651 414 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 DUOXA1Q1HG43 343 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 CTU2Q2VPK5 515 aaKnown RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 CATSPEREQ5SY80 951 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 C10orf62Q5T681 223 aaPredicted RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 BROXQ5VW32 411 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 FAM46CQ5VWP2 391 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 XAF1Q6GPH4 301 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 FIP1L1Q6UN15 594 aaKnown RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 FAM83HQ6ZRV2 1179 aaPredicted RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 TMEM179BQ7Z7N9 219 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 CACUL1Q86Y37 369 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms