RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ZFP36L2P47974 494 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 DGKQP52824 942 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 EIF3BP55884 814 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 RWDD2BP57060 319 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 MEF2AQ02078 507 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 SKOR2Q2VWA4 1001 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 SLC25A35Q3KQZ1 300 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 PPP1R21Q6ZMI0 780 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 PDSS2Q86YH6 399 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 LRRC56Q8IYG6 542 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 ZZZ3Q8IYH5 903 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 CAMKVQ8NCB2 501 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 PPHLN1Q8NEY8 458 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 OR52N2Q8NGI0 321 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 TM4SF19Q96DZ7 209 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 ARSGQ96EG1 525 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 BIRC8Q96P09 236 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 TMEM184CQ9NVA4 438 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 SLC22A7Q9Y694 548 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 ARHGAP21Q5T5U3 1957 aa13.32□□□□□ -0.28
PRPF40A-211ENST00000493468 OR14I1A6ND48 311 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 GOLGA6L9A6NEM1 432 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 SAGE2PA6NJ88 616 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 FIGNL2A6NMB9 653 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 H7BY64 318 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 MAGEA1P43355 309 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 ADARP55265 1226 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 CDC20BQ86Y33 519 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 CYP4Z2PQ8N1L4 340 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 PPFIBP2Q8ND30 876 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 GOT1L1Q8NHS2 421 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 SLC35B2Q8TB61 432 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 CREB3L4Q8TEY5 395 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 PEX11GQ96HA9 241 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 PRAP1Q96NZ9 151 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 TTYH2Q9BSA4 534 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 ZDHHC11Q9H8X9 412 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 TREX1Q9NSU2 369 aa13.31□□□□□ -0.28
PRPF40A-211ENST00000493468 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 FEZF1A0PJY2 475 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 BCKDKO14874 412 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 NIPSNAP2O75323 286 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 CDC123O75794 336 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 STATHP02808 62 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 ESR1P03372 595 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 HEXAP06865 529 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 FHP07954 510 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 INHBBP09529 407 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 JAK1P23458 1154 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 FDFT1P37268 417 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 GRIA1P42261 906 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 KIR2DL3P43628 341 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 KLHL38Q2WGJ6 581 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 GXYLT1Q4G148 440 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 CAVIN1Q6NZI2 390 aaKnown RBP13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 AADACL2Q6P093 401 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 RGS9BPQ6ZS82 235 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 KIAA0408Q6ZU52 694 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 WFDC11Q8NEX6 87 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 LPGAT1Q92604 370 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 ALG3Q92685 438 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 TBC1D20Q96BZ9 403 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 SMR3AQ99954 134 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 RBCK1Q9BYM8 510 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 PNPLA3Q9NST1 481 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 TSR3Q9UJK0 312 aaKnown RBP13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 NAALAD2Q9Y3Q0 740 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 FAM215AQ9Y5M1 114 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 GTF3C3Q9Y5Q9 886 aa13.3□□□□□ -0.28
PRPF40A-211ENST00000493468 A0A0G2JNJ9 132 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 A6NNC1 897 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 FAM171A2A8MVW0 826 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 FAM47E-STBD1D6RA91 191 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 PDE9AO76083 593 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 RAF1P04049 648 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 TUBB4AP04350 444 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 GLI4P10075 376 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 ADSLP30566 484 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 HOXC12P31275 282 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 KLF1Q13351 362 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 HERC3Q15034 1050 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 RPS6KA1Q15418 735 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 TYSND1Q2T9J0 566 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 DEFB113Q30KQ7 82 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 ACSBG2Q5FVE4 666 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 PCID2Q5JVF3 399 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 THEMIS2Q5TEJ8 643 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 NIPAL1Q6NVV3 410 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 QSOX2Q6ZRP7 698 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 ASPGQ86U10 573 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 CNGA4Q8IV77 575 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 AFAP1L2Q8N4X5 818 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 KCT2Q8NC54 265 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 ACRBPQ8NEB7 543 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 NFAM1Q8NET5 270 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 OR10Q1Q8NGQ4 319 aa13.29□□□□□ -0.28
PRPF40A-211ENST00000493468 SPATA3Q8NHX4 192 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms