RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 IL11RAQ14626 422 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 HERC3Q15034 1050 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 NR6A1Q15406 480 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ZIC1Q15915 447 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ADPRMQ3LIE5 342 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 SPDYAQ5MJ70 313 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 PHF19Q5T6S3 580 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 KHDRBS2Q5VWX1 349 aaKnown RBP10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ACSM2BQ68CK6 577 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ATG14Q6ZNE5 492 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 SLITRK4Q8IW52 837 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 GPR135Q8IZ08 494 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 CSNK1A1LQ8N752 337 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ANKRD53Q8N9V6 530 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 CCDC197Q8NCU1 140 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ZNF740Q8NDX6 193 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 CREB3L4Q8TEY5 395 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ZDHHC16Q969W1 377 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 RGMAQ96B86 450 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 TM4SF19Q96DZ7 209 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 FAM122AQ96E09 287 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ZNF285Q96NJ3 590 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 KCNC2Q96PR1 638 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 DEPDC7Q96QD5 511 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 MTERF1Q99551 399 aaKnown RBP10.55□□□□□ -0.72
HDLBP-242ENST00000488013 TBCDQ9BTW9 1192 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 MS4A8Q9BY19 250 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 REXO4Q9GZR2 422 aaKnown RBP10.55□□□□□ -0.72
HDLBP-242ENST00000488013 TUBB1Q9H4B7 451 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 TNFRSF12AQ9NP84 129 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 KLHL3Q9UH77 587 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 ADAM29Q9UKF5 820 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 CDV3Q9UKY7 258 aaKnown RBP10.55□□□□□ -0.72
HDLBP-242ENST00000488013 SLC12A4Q9UP95 1085 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 EIF3LQ9Y262 564 aaKnown RBP10.55□□□□□ -0.72
HDLBP-242ENST00000488013 RUVBL1Q9Y265 456 aaKnown RBP10.55□□□□□ -0.72
HDLBP-242ENST00000488013 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 SLC22A7Q9Y694 548 aa10.55□□□□□ -0.72
HDLBP-242ENST00000488013 FEZF1A0PJY2 475 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ARHGAP10A1A4S6 786 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 LRIT2A6NDA9 550 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 MAGEB17A8MXT2 336 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 H0YGG7 62 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 SDHDO14521 159 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 KIF1CO43896 1103 aaKnown RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 LCMT2O60294 686 aaKnown RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 DCTN3O75935 186 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 SERPIND1P05546 499 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 HBQ1P09105 142 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 IDO1P14902 403 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ARSFP54793 590 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ARF3P61204 181 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 RPS13P62277 151 aaKnown RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ERVK-8P63133 956 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 YBX1P67809 324 aaKnown RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 CBX1P83916 185 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 MEF2AQ02078 507 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 EMX2Q04743 252 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 CYP4F3Q08477 520 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 FAM53BQ14153 422 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 GSTA3Q16772 222 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 AP5B1Q2VPB7 878 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 SNAP47Q5SQN1 464 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 NXNQ6DKJ4 435 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 GALNT18Q6P9A2 607 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 TRIM40Q6P9F5 258 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ZNF574Q6ZN55 896 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 Q6ZSR9 355 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 LARP4Q71RC2 724 aaKnown RBP eCLIP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ZFAND4Q86XD8 727 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 FAM20CQ8IXL6 584 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 TTC29Q8NA56 475 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 OR2L5Q8NG80 312 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 STARD8Q92502 1023 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 GAL3ST3Q96A11 431 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 MTFMTQ96DP5 389 aaKnown RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 MVB12AQ96EY5 273 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 CCDC74BQ96LY2 380 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ZPBPQ9BS86 351 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 TMEM120AQ9BXJ8 343 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ACPTQ9BZG2 426 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 SLC6A16Q9GZN6 736 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 SPNS1Q9H2V7 528 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 AKTIPQ9H8T0 292 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 IRAK4Q9NWZ3 460 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ASIC5Q9NY37 505 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 ATXN7L1Q9ULK2 861 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-242ENST00000488013 SRPK3Q9UPE1 567 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 KLHL20Q9Y2M5 609 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 CCL27Q9Y4X3 112 aa10.54□□□□□ -0.72
HDLBP-242ENST00000488013 FITM1A5D6W6 292 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 B4E171 279 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 TM4SF5O14894 197 aa10.53□□□□□ -0.72
HDLBP-242ENST00000488013 LSM1O15116 133 aaKnown RBP10.53□□□□□ -0.72
HDLBP-242ENST00000488013 UBDO15205 165 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms