RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 EDN1P05305 212 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 EPCAMP16422 314 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 NTSR1P30989 418 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 KCNC3Q14003 757 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 SYT16Q17RD7 645 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 ZNF527Q8NB42 609 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 SCRN2Q96FV2 425 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 TBX5Q99593 518 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 GAL3ST1Q99999 423 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 MTG2Q9H4K7 406 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 TRIM39Q9HCM9 518 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 SDHDO14521 159 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 ACRV1P26436 265 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 FMO3P31513 532 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 DNASE1L1P49184 302 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 SIX1Q15475 284 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-241ENST00000487169 ADGRD2Q7Z7M1 963 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 TSPAN33Q86UF1 283 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 TRIM73Q86UV7 250 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 SERINC1Q9NRX5 453 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 RIMKLBQ9ULI2 386 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 TAF4O00268 1085 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 COQ9O75208 318 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 SPINT3P49223 89 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 DEFB103AP81534 67 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 IL18R1Q13478 541 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 ZNF267Q14586 743 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-241ENST00000487169 TMEM44Q2T9K0 475 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 GFOD2Q3B7J2 385 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 ZNF542PQ5EBM4 170 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 CCDC116Q8IYX3 515 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 PNPLA1Q8N8W4 532 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 OR56A1Q8NGH5 318 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 RIT1Q92963 219 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 PGAP3Q96FM1 320 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-241ENST00000487169 TRIM2Q9C040 744 aa12.92□□□□□ -0.34
HDLBP-241ENST00000487169 RP1P56715 2156 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 TCRBV21S2A2A0A5A6 115 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 VEGFDO43915 354 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 C6P13671 934 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 FAUP35544 74 aaKnown RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 TREML1Q86YW5 311 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 CHST14Q8NCH0 376 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 PHOSPHO1Q8TCT1 267 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 UTP4Q969X6 686 aaKnown RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 BIRC7Q96CA5 298 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 C1orf21Q9H246 121 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 IL21RQ9HBE5 538 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 PIAS3Q9Y6X2 628 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 DOT1LQ8TEK3 1739 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 RNGTTO60942 597 aaKnown RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 TM4SF4P48230 202 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 CST6Q15828 149 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 DEFB134Q4QY38 66 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 HTRA1Q92743 480 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 DPH7Q9BTV6 452 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 HERC2P3Q9BVR0 1158 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 RBCK1Q9BYM8 510 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 TRIM8Q9BZR9 551 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 RGS17Q9UGC6 210 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 ZNF222Q9UK12 451 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 SCDO00767 359 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 DBIP07108 87 aaKnown RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 BPIP17213 487 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 SDC2P34741 201 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 ACADVLP49748 655 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 ST3GAL3Q11203 375 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 TLR1Q15399 786 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 UNC50Q53HI1 259 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 C10orf62Q5T681 223 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 LIPJQ5W064 366 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 MEIOBQ8N635 442 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 MMABQ96EY8 250 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 NECTIN4Q96NY8 510 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 KCNC2Q96PR1 638 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 PKP2Q99959 881 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 REEP4Q9H6H4 257 aa12.91□□□□□ -0.34
HDLBP-241ENST00000487169 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-241ENST00000487169 A0A1B0GVG6 124 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 SRCP12931 536 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 FUT4P22083 530 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 NUDT6P53370 316 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 CDKN2DP55273 166 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 ELOCQ15369 112 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 DECR1Q16698 335 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 OR52B6Q8NGF0 335 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 PIGKQ92643 395 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 KCNS3Q9BQ31 491 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 CENPMQ9NSP4 180 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 PCDHGA2Q9Y5H1 932 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 MYH1P12882 1939 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 CH25HO95992 272 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 RENP00797 406 aa12.9□□□□□ -0.34
HDLBP-241ENST00000487169 FPR1P21462 350 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms