RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 C1GALT1C1Q96EU7 318 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ANKRD60Q9BZ19 345 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 NAA50Q9GZZ1 169 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 FARSBQ9NSD9 589 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 PCTPQ9UKL6 214 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 CLEC4EQ9ULY5 219 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 GTF2A1LQ9UNN4 478 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 OR1A2Q9Y585 309 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 PRSS21Q9Y6M0 314 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ATG2BQ96BY7 2078 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 A0A1W2PQ72 361 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 A0A1W2PRB8 838 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ERI3O43414 337 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 SERPINB7O75635 380 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 SCELO95171 688 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 PDYNP01213 254 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 C8BP07358 591 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 NUDT6P53370 316 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 CDH12P55289 794 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 TUBA3CQ13748 450 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 NANOGP8Q6NSW7 305 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 HTR3DQ70Z44 454 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 KCT2Q8NC54 265 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ABHD11Q8NFV4 315 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ZUFSPQ96AP4 578 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 TRMT2BQ96GJ1 504 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 FUNDC2Q9BWH2 189 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 SFXN1Q9H9B4 322 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 NANOGQ9H9S0 305 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 LHX3Q9UBR4 397 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ENOPH1Q9UHY7 261 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 SLC9A8Q9Y2E8 581 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 COL11A1P12107 1806 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 PAPPA2Q9BXP8 1791 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 KRBA1A5PL33 1030 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 GLOD5A6NK44 160 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 MID1O15344 667 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 AP2A2O94973 939 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ALPPL2P10696 532 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 GTF2E2P29084 291 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 OPRL1P41146 370 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 TAS2R50P59544 299 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 NFE2L1Q14494 772 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 TIGD6Q17RP2 521 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 TCEAL5Q5H9L2 206 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 SNX29P2Q8IUI4 249 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 OR5K1Q8NHB7 308 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 FGF13Q92913 245 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 FNDC11Q9BVV2 318 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 RETREG1Q9H6L5 497 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 ZCCHC3Q9NUD5 404 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 CNOT11Q9UKZ1 510 aaKnown RBP10.93□□□□□ -0.66
SMPD4-218ENST00000482171 SPEF1Q9Y4P9 236 aa10.93□□□□□ -0.66
SMPD4-218ENST00000482171 NT5EP21589 574 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ALAS2P22557 587 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 RPL34P49207 117 aaKnown RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ABATP80404 500 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 SCN1BQ07699 218 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 C6orf141Q5SZD1 244 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 HSD11B1LQ7Z5J1 315 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 FAM46DQ8NEK8 389 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 C3orf30Q96M34 536 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF607Q96SK3 696 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 MEAF6Q9HAF1 191 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 PCDHGA7Q9Y5G6 932 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 H0YJX3 145 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ERN1O75460 977 aaKnown RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 RPLP0P05388 317 aaKnown RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 FABP3P05413 133 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 SLC6A11P48066 632 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 CD83Q01151 205 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 RAB30Q15771 203 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF404Q494X3 552 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 CXorf57Q6NSI4 855 aaKnown RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 FAM180BQ6P0A1 224 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 BORAQ6PGQ7 559 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 IGFN1Q86VF2 1251 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ANKFN1Q8N957 763 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 OR9A1PQ8NGU1 263 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 CNIH3Q8TBE1 160 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 GTPBP3Q969Y2 492 aaKnown RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF597Q96LX8 424 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 P2RY13Q9BPV8 354 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 CNPPD1Q9BV87 410 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 OARD1Q9Y530 152 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 H3BQ06 376 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 INMTO95050 263 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 KLF8O95600 359 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 SLC35G6P0C7Q6 338 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ITGA2P17301 1181 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 PSMA1P25786 263 aaKnown RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 TXNL4AP83876 142 aaKnown RBP10.92□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF542PQ5EBM4 170 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 PLEKHS1Q5SXH7 462 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 TICAM1Q8IUC6 712 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 GALNT12Q8IXK2 581 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 TRAM1L1Q8N609 369 aa10.92□□□□□ -0.66
SMPD4-218ENST00000482171 LRRC17Q8N6Y2 441 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms