RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 GSX1Q9H4S2 264 aaPredicted RBP13.84□□□□□ -0.19
USP11-207ENST00000478596 KIR3DX1Q9H7L2 352 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 PARVBQ9HBI1 364 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 P4HTMQ9NXG6 502 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 WWOXQ9NZC7 414 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 DCDC2Q9UHG0 476 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 MID2Q9UJV3 735 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 ADAMTS6Q9UKP5 1117 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 ZNF839A8K0R7 811 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 C9J4A7 227 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 MAP2K7O14733 419 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 KERAO60938 352 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 WISP3O95389 354 aaPredicted RBP13.83□□□□□ -0.2
USP11-207ENST00000478596 MATN4O95460 622 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 FOSL1P15407 271 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 SHMT2P34897 504 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 Q0VFX4 171 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 OR4D1Q15615 310 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 TECRLQ5HYJ1 363 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.83□□□□□ -0.2
USP11-207ENST00000478596 KLHL35Q6PF15 583 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 MBOAT1Q6ZNC8 495 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 PLD6Q8N2A8 252 aaKnown RBP13.83□□□□□ -0.2
USP11-207ENST00000478596 ANKRD42Q8N9B4 389 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 OR52E1Q8NGJ3 308 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 ASB11Q8WXH4 323 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 KIAA1191Q96A73 305 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 PTERQ96BW5 349 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 PDLIM5Q96HC4 596 aaKnown RBP13.83□□□□□ -0.2
USP11-207ENST00000478596 UBXN10Q96LJ8 280 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 GBP5Q96PP8 586 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 TREX2Q9BQ50 279 aaPredicted RBP13.83□□□□□ -0.2
USP11-207ENST00000478596 ENKD1Q9H0I2 346 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 SRMSQ9H3Y6 488 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 TFB2MQ9H5Q4 396 aaKnown RBP13.83□□□□□ -0.2
USP11-207ENST00000478596 XKR8Q9H6D3 395 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 ATP13A2Q9NQ11 1180 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 DLL4Q9NR61 685 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 ZNF358Q9NW07 568 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 NKIRAS1Q9NYS0 192 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 NUDT4Q9NZJ9 180 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 GRID1Q9ULK0 1009 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 OARD1Q9Y530 152 aa13.83□□□□□ -0.2
USP11-207ENST00000478596 MDC1Q14676 2089 aaKnown RBP13.83□□□□□ -0.2
USP11-207ENST00000478596 STAB1Q9NY15 2570 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 GSAPA4D1B5 854 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 KRT87PA6NCN2 255 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 HMGB1P1B2RPK0 211 aaPredicted RBP13.82□□□□□ -0.2
USP11-207ENST00000478596 AGPSO00116 658 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 UBXN8O00124 270 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 ZBTB11O95625 1053 aaPredicted RBP13.82□□□□□ -0.2
USP11-207ENST00000478596 ANXA5P08758 320 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 MYL2P10916 166 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 AP1S2P56377 157 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 PPP2R2AP63151 447 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 ADORA2A-AS1P86434 159 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 PRKAA1Q13131 559 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 AIMP2Q13155 320 aaKnown RBP13.82□□□□□ -0.2
USP11-207ENST00000478596 PHKG1Q16816 387 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 CCDC153Q494R4 210 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 TMTC4Q5T4D3 741 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 THEMIS2Q5TEJ8 643 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 GFRALQ6UXV0 394 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 OOSP2Q86WS3 158 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 OR9A1PQ8NGU1 263 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 SREK1Q8WXA9 508 aaKnown RBP13.82□□□□□ -0.2
USP11-207ENST00000478596 ATL1Q8WXF7 558 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 NR4A3Q92570 626 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 ARL8AQ96BM9 186 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 IL17FQ96PD4 163 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 FOXC2Q99958 501 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 PAIP2Q9BPZ3 127 aaKnown RBP13.82□□□□□ -0.2
USP11-207ENST00000478596 MRPL57Q9BQC6 102 aaKnown RBP13.82□□□□□ -0.2
USP11-207ENST00000478596 PRM3Q9NNZ6 103 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 SPATA7Q9P0W8 599 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 IKZF3Q9UKT9 509 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 PDE10AQ9Y233 779 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 RPH3AQ9Y2J0 694 aaPredicted RBP13.82□□□□□ -0.2
USP11-207ENST00000478596 PCDHGB6Q9Y5F9 930 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 ACTL7BQ9Y614 415 aa13.82□□□□□ -0.2
USP11-207ENST00000478596 NSD1Q96L73 2696 aaPredicted RBP13.81□□□□□ -0.2
USP11-207ENST00000478596 ATP8B1O43520 1251 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 CLDN14O95500 239 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 NEFHP12036 1026 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 PKLRP30613 574 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 ARL1P40616 181 aaPredicted RBP13.81□□□□□ -0.2
USP11-207ENST00000478596 RAB28P51157 221 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 SMSP52788 366 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 PTCHD3Q3KNS1 767 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 CCSMST1Q4G0I0 132 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 TTMPQ5BVD1 217 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 SBSNQ6UWP8 590 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 CYHR1Q6ZMK1 362 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 EXOC3L1Q86VI1 746 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 AMIGO1Q86WK6 493 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 CARFQ8N187 725 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 OR4E2Q8NGC2 313 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms