RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 RPP38P78345 283 aaKnown RBP17.45■□□□□ 0.38
HPS3-202ENST00000460120 NFE2L1Q14494 772 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 RFX4Q33E94 735 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 COMMD6Q7Z4G1 85 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 SYNPOQ8N3V7 929 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 NFKBIDQ8NI38 313 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 RPL3LQ92901 407 aaKnown RBP17.45■□□□□ 0.38
HPS3-202ENST00000460120 SELENONQ9NZV5 590 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 PCDHGA10Q9Y5H3 936 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 J3KTA2 159 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 C1orf105O95561 183 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 ITGAMP11215 1152 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 TIA1P31483 386 aaKnown RBP eCLIP17.44■□□□□ 0.38
HPS3-202ENST00000460120 RYKP34925 604 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 MASP1P48740 699 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 CCR3P51677 355 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 NUDT6P53370 316 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 PRMT2P55345 433 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 TOP3AQ13472 1001 aaPredicted RBP17.44■□□□□ 0.38
HPS3-202ENST00000460120 ZNF77Q15935 545 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 SLCO4C1Q6ZQN7 724 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 ARMCX6Q7L4S7 300 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 SLCO6A1Q86UG4 719 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 SLC44A2Q8IWA5 706 aaPredicted RBP17.44■□□□□ 0.38
HPS3-202ENST00000460120 POF1BQ8WVV4 589 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 SLC35A5Q9BS91 424 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 RLIMQ9NVW2 624 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 CHCHD3Q9NX63 227 aaKnown RBP17.44■□□□□ 0.38
HPS3-202ENST00000460120 SNX8Q9Y5X2 465 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 BOLA2-SMG1P6H3BVE0 249 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 LCKP06239 509 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 INHBBP09529 407 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 CD6P30203 668 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 GPR1P46091 355 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 SLC6A11P48066 632 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 TAS2R50P59544 299 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 ST8SIA6P61647 398 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 NCS1P62166 190 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 KCNJ10P78508 379 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 C2orf80Q0P641 193 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 TUBA3CQ13748 450 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 MOGQ16653 247 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 NEK10Q6ZWH5 1172 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 DPPA4Q7L190 304 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 SETD9Q8NE22 299 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 ABHD11Q8NFV4 315 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 ZFP90Q8TF47 636 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 TIFAQ96CG3 184 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 ADPRHL2Q9NX46 363 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 SCN3BQ9NY72 215 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 RHCGQ9UBD6 479 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 ENPP5Q9UJA9 477 aa17.44■□□□□ 0.38
HPS3-202ENST00000460120 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.44■□□□□ 0.38
HPS3-202ENST00000460120 PCYT1BQ9Y5K3 369 aaPredicted RBP17.44■□□□□ 0.38
HPS3-202ENST00000460120 LINC00271P0C7V0 271 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 NPPBP16860 134 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 ZNF8P17098 575 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 DCDC1P59894 354 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 COL9A2Q14055 689 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 DHCR24Q15392 516 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 CTF1Q16619 201 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 ERICH5Q6P6B1 374 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 OR56A3Q8NH54 315 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 CHTF18Q8WVB6 975 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 FCRL1Q96LA6 429 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 APOL4Q9BPW4 351 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 ALOXE3Q9BYJ1 711 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 DYRK1BQ9Y463 629 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 C1orf226A1L170 272 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 LZTS3O60299 673 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 PCDHGA12O60330 932 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 GCM2O75603 506 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 TIMP1P01033 207 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 CHI3L1P36222 383 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 IDH2P48735 452 aaKnown RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 PRIM2P49643 509 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 CDH12P55289 794 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 CAMK2GQ13555 558 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 KCNC3Q14003 757 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 GANABQ14697 944 aaKnown RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 FNDC3BQ53EP0 1204 aaKnown RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 PERM1Q5SV97 790 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 KIAA1614Q5VZ46 1190 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 CAPN13Q6MZZ7 669 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 C12orf76Q8N812 135 aaPredicted RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 DNAAF2Q9NVR5 837 aaKnown RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 GPATCH2Q9NW75 528 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 SH3GLB1Q9Y371 365 aa17.43■□□□□ 0.38
HPS3-202ENST00000460120 KIAA0100Q14667 2235 aaKnown RBP17.43■□□□□ 0.38
HPS3-202ENST00000460120 RTCAO00442 366 aaKnown RBP17.42■□□□□ 0.38
HPS3-202ENST00000460120 UGDHO60701 494 aa17.42■□□□□ 0.38
HPS3-202ENST00000460120 RPS26P62854 115 aaKnown RBP17.42■□□□□ 0.38
HPS3-202ENST00000460120 SPIBQ01892 262 aa17.42■□□□□ 0.38
HPS3-202ENST00000460120 NPRL3Q12980 569 aa17.42■□□□□ 0.38
HPS3-202ENST00000460120 MAD2L1BPQ15013 274 aaPredicted RBP17.42■□□□□ 0.38
HPS3-202ENST00000460120 SYT16Q17RD7 645 aa17.42■□□□□ 0.38
HPS3-202ENST00000460120 PRSS53Q2L4Q9 553 aa17.42■□□□□ 0.38
HPS3-202ENST00000460120 RNF130Q86XS8 419 aa17.42■□□□□ 0.38
HPS3-202ENST00000460120 FEVQ99581 238 aa17.42■□□□□ 0.38
HPS3-202ENST00000460120 GPN2Q9H9Y4 310 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms