RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 WFS1O76024 890 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 SERPINA6P08185 405 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 RPS17P08708 135 aaKnown RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 SMIM10L1P0DMW3 83 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 GFAPP14136 432 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 IL1RNP18510 177 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 CCR10P46092 362 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 RGS1Q08116 209 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 PFKFB4Q16877 469 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 ERCC6LQ2NKX8 1250 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 ADPRMQ3LIE5 342 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 CPZQ66K79 652 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 TMIGD1Q6UXZ0 262 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 ZC3H7AQ8IWR0 971 aaKnown RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 MREGQ8N565 214 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 SNX31Q8N9S9 440 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 TRPV3Q8NET8 790 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 ZCCHC10Q8TBK6 192 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 STT3BQ8TCJ2 826 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 APOBEC4Q8WW27 367 aaKnown RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 SMIM10Q96HG1 83 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 IP6K3Q96PC2 410 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 MRPL57Q9BQC6 102 aaKnown RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 CCDC77Q9BR77 488 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 C1QTNF3Q9BXJ4 246 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 SEMA4CQ9C0C4 833 aa13.44□□□□□ -0.26
HDAC4-205ENST00000454542 MRPL46Q9H2W6 279 aaKnown RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 ZNF282Q9UDV7 671 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-205ENST00000454542 E2F3O00716 465 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 CLEC3AO75596 197 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 C1QL1O75973 258 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 CYC1P08574 325 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 ZGLP1P0C6A0 271 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 MMP11P24347 488 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 AVPR1BP47901 424 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 EFNA3P52797 238 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 CHIT1Q13231 466 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 ATP1A4Q13733 1029 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 DOC2AQ14183 400 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 HERC3Q15034 1050 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 LAS2Q8IYD9 372 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 KRT78Q8N1N4 520 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 PTGR2Q8N8N7 351 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-205ENST00000454542 OR9A4Q8NGU2 314 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 EPS8L3Q8TE67 593 aaKnown RBP13.43□□□□□ -0.26
HDAC4-205ENST00000454542 UTP15Q8TED0 518 aaKnown RBP13.43□□□□□ -0.26
HDAC4-205ENST00000454542 SLC39A7Q92504 469 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 COL26A1Q96A83 441 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 MMABQ96EY8 250 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-205ENST00000454542 TRIM55Q9BYV6 548 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 RHBGQ9H310 441 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-205ENST00000454542 CPSF2Q9P2I0 782 aaKnown RBP13.43□□□□□ -0.26
HDAC4-205ENST00000454542 TSC22D4Q9Y3Q8 395 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 TNPO3Q9Y5L0 923 aaKnown RBP13.43□□□□□ -0.26
HDAC4-205ENST00000454542 HS3ST3B1Q9Y662 390 aa13.43□□□□□ -0.26
HDAC4-205ENST00000454542 KALRNO60229 2985 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 LRRC14BA6NHZ5 514 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 SOCS6O14544 535 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 UGDHO60701 494 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 GALR3O60755 368 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-205ENST00000454542 CDH16O75309 829 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 CEACAM4O75871 244 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 KLHL18O94889 574 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 SIX3O95343 332 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-205ENST00000454542 GSTA1P08263 222 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 FAM87AP0C7U9 286 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 EPB42P16452 691 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 ALOX12P18054 663 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 PIK3CGP48736 1102 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 MAT1AQ00266 395 aaKnown RBP13.42□□□□□ -0.26
HDAC4-205ENST00000454542 IRF8Q02556 426 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 OCA2Q04671 838 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 KLC1Q07866 573 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 KCNAB2Q13303 367 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 LAPTM5Q13571 262 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 LY6DQ14210 128 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 SYT16Q17RD7 645 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 VWA2Q5GFL6 755 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 XKR6Q5GH73 641 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 PAGE2BQ5JRK9 111 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 ADNP2Q6IQ32 1131 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 GRHL2Q6ISB3 625 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 NIPAL1Q6NVV3 410 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 SHISA5Q8N114 240 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 RIBC1Q8N443 379 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-205ENST00000454542 GAL3ST3Q96A11 431 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 MIEF2Q96C03 454 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 ANKHQ9HCJ1 492 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 SEMA3GQ9NS98 782 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 TMEM216Q9P0N5 145 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 TRPC4Q9UBN4 977 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 PCTPQ9UKL6 214 aa13.42□□□□□ -0.26
HDAC4-205ENST00000454542 ZNF490Q9ULM2 529 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-205ENST00000454542 A8MT66 165 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 SGK494L7N484 410 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 PCDH17O14917 1159 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms