RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 AKT2P31751 481 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 SOX6P35712 828 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC6A12P48065 614 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 GBX2P52951 348 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 SULT2A1Q06520 285 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 OVGP1Q12889 678 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 GIT2Q14161 759 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 AGAP6Q5VW22 663 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 PRAMEF7Q5VXH5 474 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 PM20D1Q6GTS8 502 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 ARSKQ6UWY0 536 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 LAX1Q8IWV1 398 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 BANPQ8N9N5 519 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 PPFIBP2Q8ND30 876 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 OR56B1Q8NGI3 324 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC26A7Q8TE54 656 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 CCDC107Q8WV48 283 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 ESAMQ96AP7 390 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 CNDP1Q96KN2 507 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 SPAG8Q99932 426 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC39A8Q9C0K1 460 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 ATG10Q9H0Y0 220 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 FANCFQ9NPI8 374 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 MRPL17Q9NRX2 175 aaKnown RBP4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 GKN1Q9NS71 199 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 PIGVQ9NUD9 493 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 KCNJ14Q9UNX9 436 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 RUVBL2Q9Y230 463 aaKnown RBP4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 WDR83OSQ9Y284 106 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF510Q9Y2H8 683 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMED3Q9Y3Q3 217 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 KLK4Q9Y5K2 254 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 PCDH11YQ9BZA8 1340 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 KDRP35968 1356 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 MED19A0JLT2 244 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 ANKDD1BA6NHY2 528 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 C15orf62A8K5M9 175 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM150CB9EJG8 249 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 UBXN8O00124 270 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 BMPR1BO00238 502 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC28A1O00337 649 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 GMFGO60234 142 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 PDE9AO76083 593 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 SP9P0CG40 484 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 PKLRP30613 574 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 TRPC1P48995 793 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 SULT1E1P49888 294 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 MTTPP55157 894 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 HUNKP57058 714 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 IL10RBQ08334 325 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 GAGE5Q13069 117 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 GAGE6Q13070 117 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 PDZK1IP1Q13113 114 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 PRKAA1Q13131 559 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 NONOQ15233 471 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 CA9Q16790 459 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 ELFN2Q5R3F8 820 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF770Q6IQ21 691 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 SIGLEC15Q6ZMC9 328 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF852Q6ZMS4 543 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 LPCAT2Q7L5N7 544 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 NFE4Q86UQ8 179 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 RNF128Q8TEB7 428 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 CD101Q93033 1021 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 C16orf58Q96GQ5 468 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM71F1Q96KD3 344 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 NECTIN4Q96NY8 510 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 SSX3Q99909 188 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 TCHPQ9BT92 498 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 POLR3CQ9BUI4 534 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 TPPP3Q9BW30 176 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 UBQLN3Q9H347 655 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 TFB2MQ9H5Q4 396 aaKnown RBP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 ACKR4Q9NPB9 350 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 ATAD3AQ9NVI7 634 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMOD3Q9NYL9 352 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 WWOXQ9NZC7 414 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 COX16Q9P0S2 106 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 RABL2AQ9UBK7 228 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 CTNNA3Q9UI47 895 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 CEP164Q9UPV0 1460 aa4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF608Q9ULD9 1512 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P48-201ENST00000446155 A0A0G2JNG1 304 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 TEX13DA0A0J9YY54 714 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 MAGEB16A2A368 324 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 SLC15A5A6NIM6 579 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 IFITM10A6NMD0 228 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 AP3B1O00203 1094 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 E2F3O00716 465 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 PFASO15067 1338 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 SYNGR3O43761 229 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 XPNPEP2O43895 674 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 SNX3O60493 162 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 BAG4O95429 457 aaKnown RBP4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 PRAMEF12O95522 483 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 GAS8O95995 478 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 KRT8P05787 483 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 DLATP10515 647 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms