RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 FRG2BQ96QU4 278 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 FNIP2Q9P278 1114 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 MUTYHQ9UIF7 546 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 POFUT2Q9Y2G5 429 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 OARD1Q9Y530 152 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 WASH4PA8MWX3 477 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 BTN3A3O00478 584 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 ARHGAP33O14559 1287 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 TNFRSF10BO14763 440 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 CASKO14936 926 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 TBL1XO60907 577 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 KCNK5O95279 499 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 ANXA8P13928 327 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 CNR2P34972 360 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 SRP54P61011 504 aaKnown RBP8.74□□□□□ -1.01
COPB1-202ENST00000439561 FCHO2Q0JRZ9 810 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 LEXMQ3ZCV2 418 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 SMUG1Q53HV7 270 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 C22orf42Q6IC83 251 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 CDH24Q86UP0 819 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 AMIGO1Q86WK6 493 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 TIGD4Q8IY51 512 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 C1orf52Q8N6N3 182 aaKnown RBP8.74□□□□□ -1.01
COPB1-202ENST00000439561 HJURPQ8NCD3 748 aaPredicted RBP8.74□□□□□ -1.01
COPB1-202ENST00000439561 FLCNQ8NFG4 579 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 CSGALNACT1Q8TDX6 532 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 SLC39A13Q96H72 371 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 SUSD3Q96L08 255 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 SLX1AQ9BQ83 275 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 MGME1Q9BQP7 344 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 ZC4H2Q9NQZ6 224 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 TVP23BQ9NYZ1 205 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 FLRT1Q9NZU1 646 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 DNMT3LQ9UJW3 386 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 NAALAD2Q9Y3Q0 740 aa8.74□□□□□ -1.01
COPB1-202ENST00000439561 SPIN1Q9Y657 262 aaPredicted RBP8.74□□□□□ -1.01
COPB1-202ENST00000439561 ZNF197O14709 1029 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 ICMTO60725 284 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 PDE9AO76083 593 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 HOXD9P28356 352 aaPredicted RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 SLC6A4P31645 630 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 GSTM5P46439 218 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 ITGA1P56199 1179 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 SRSF11Q05519 484 aaKnown RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 NAE1Q13564 534 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 BAK1Q16611 211 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 KLHDC8BQ8IXV7 354 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 UBQLNLQ8IYU4 475 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 OR5H6Q8NGV6 325 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 SGK2Q9HBY8 427 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 DNAJC11Q9NVH1 559 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 FBXL12Q9NXK8 326 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 ING3Q9NXR8 418 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 MAT2BQ9NZL9 334 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 TRPS1Q9UHF7 1281 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 ZNF222Q9UK12 451 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 ERVW-1Q9UQF0 538 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 GJB5O95377 273 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 MYL12AP19105 171 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CYP2A7P20853 494 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 UQCRC1P31930 480 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 UGT2B10P36537 528 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CLCN4P51793 760 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CAV3P56539 151 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 E2F2Q14209 437 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 WDR45BQ5MNZ6 344 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 GDF6Q6KF10 455 aaPredicted RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 TTC23LQ6PF05 361 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 DPY19L3Q6ZPD9 716 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 BCDIN3DQ7Z5W3 292 aaKnown RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 ZFP41Q8N8Y5 198 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CRELD1Q96HD1 420 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 HRASLS5Q96KN8 279 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 SNX18Q96RF0 628 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 DOHHQ9BU89 302 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 PCDH10Q9P2E7 1040 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 NLKQ9UBE8 527 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CMAHPQ9Y471 501 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 THSD7AQ9UPZ6 1657 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 MIA3Q5JRA6 1907 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 SIP14410 1827 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 MYO10Q9HD67 2058 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 A0A1W2PQL4 384 aaPredicted RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 OR2AG2A6NM03 316 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 FADS2P1A8MWK0 482 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 PCDH17O14917 1159 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 PCDH7O60245 1069 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 KLK8O60259 260 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CLDN11O75508 207 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 HOXB6P17509 224 aaKnown RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 PTPN2P17706 415 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 RPL17P18621 184 aaKnown RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 RPS19P39019 145 aaKnown RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 CDH4P55283 916 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 ALDH6A1Q02252 535 aaKnown RBP8.73□□□□□ -1.01
COPB1-202ENST00000439561 NFATC2Q13469 925 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 SCARB2Q14108 478 aa8.73□□□□□ -1.01
COPB1-202ENST00000439561 CBLL1Q75N03 491 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms