RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 CAV3P56539 151 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 PPIGQ13427 754 aaKnown RBP eCLIP17.45■□□□□ 0.38
KCNC4-204ENST00000438661 WSCD2Q2TBF2 565 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 CTRB2Q6GPI1 263 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 CCDC149Q6ZUS6 474 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 C16orf62Q7Z3J2 963 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 POLR1EQ9GZS1 481 aaKnown RBP17.45■□□□□ 0.38
KCNC4-204ENST00000438661 HHATLQ9HCP6 504 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 DIABLOQ9NR28 239 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 ELOVL2Q9NXB9 296 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 PPT2Q9UMR5 302 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 PTCH2Q9Y6C5 1203 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 ETV3P41162 512 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 MLLT6P55198 1093 aaPredicted RBP17.45■□□□□ 0.38
KCNC4-204ENST00000438661 TIGD5Q53EQ6 642 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 SDHAF4Q5VUM1 108 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 PTCHD4Q6ZW05 846 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 PLPP6Q8IY26 295 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 GPR65Q8IYL9 337 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 OPALINQ96PE5 141 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 RAD9AQ99638 391 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 RTP3Q9BQQ7 232 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 NUP50Q9UKX7 468 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 PCDHGB3Q9Y5G1 929 aa17.45■□□□□ 0.38
KCNC4-204ENST00000438661 LOC102723532A0A0G2JNH3 316 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 FPGTO14772 594 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 HLA-DPA1P20036 260 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 DDCP20711 480 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 SPIBQ01892 262 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 TNK1Q13470 666 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 SPDYE7PQ495Y7 208 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 GALNT11Q8NCW6 608 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 OR9Q1Q8NGQ5 310 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 NPLOC4Q8TAT6 608 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 GABARAPL3Q9BY60 117 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 COMMD3Q9UBI1 195 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 AP3M1Q9Y2T2 418 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 PSIP1O75475 530 aaKnown RBP17.44■□□□□ 0.38
KCNC4-204ENST00000438661 PDE9AO76083 593 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 FEN1P39748 380 aaKnown RBP17.44■□□□□ 0.38
KCNC4-204ENST00000438661 DSC3Q14574 896 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 LARS2Q15031 903 aaKnown RBP17.44■□□□□ 0.38
KCNC4-204ENST00000438661 TRIQKQ629K1 86 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 AFMIDQ63HM1 303 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 FAM171BQ6P995 826 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 GPR142Q7Z601 462 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 TMEM86AQ8N2M4 240 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 MDGA1Q8NFP4 955 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 SPATA9Q9BWV2 254 aa17.44■□□□□ 0.38
KCNC4-204ENST00000438661 SLC28A1O00337 649 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 LRRTM2O43300 516 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 SUV39H1O43463 412 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 THP07101 528 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 PTPN6P29350 595 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 HOXC13P31276 330 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 CSTF2P33240 577 aaKnown RBP eCLIP17.43■□□□□ 0.38
KCNC4-204ENST00000438661 BEX3Q00994 111 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 AFTPHQ6ULP2 937 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 RNF175Q8N4F7 328 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 PEX13Q92968 403 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 APOLD1Q96LR9 279 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 NMUR1Q9HB89 426 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 CSNK1G1Q9HCP0 422 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 NUDT4Q9NZJ9 180 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 KLHL21Q9UJP4 597 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 SH3BGRLO75368 114 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 TPPPO94811 219 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 NAGAP17050 411 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 CPN2P22792 545 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 MAP2K3P46734 347 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 CRYBB1P53674 252 aaPredicted RBP17.43■□□□□ 0.38
KCNC4-204ENST00000438661 LRIF1Q5T3J3 769 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 C22orf42Q6IC83 251 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 CLECL1Q8IZS7 167 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 LGI4Q8N135 537 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 SLC37A3Q8NCC5 494 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 KATNAL1Q9BW62 490 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 MIXL1Q9H2W2 232 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 TAPBPO15533 448 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 PLOD3O60568 738 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 ARTNQ5T4W7 220 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 LCN1P1Q5VSP4 162 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 PAQR6Q6TCH4 344 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 CBLL1Q75N03 491 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 KCTD20Q7Z5Y7 419 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 LRRTM3Q86VH5 581 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 MIB1Q86YT6 1006 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 SCN4BQ8IWT1 228 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 PHC2Q8IXK0 858 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 TBC1D20Q96BZ9 403 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 ACPTQ9BZG2 426 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 NIPAL2Q9H841 368 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 AFF4Q9UHB7 1163 aaKnown RBP17.43■□□□□ 0.38
KCNC4-204ENST00000438661 PCDHGA2Q9Y5H1 932 aa17.43■□□□□ 0.38
KCNC4-204ENST00000438661 NINQ8N4C6 2090 aa17.42■□□□□ 0.38
KCNC4-204ENST00000438661 FADS2P1A8MWK0 482 aa17.42■□□□□ 0.38
KCNC4-204ENST00000438661 J3KTA2 159 aa17.42■□□□□ 0.38
KCNC4-204ENST00000438661 MANBAO00462 879 aa17.42■□□□□ 0.38
KCNC4-204ENST00000438661 SLC2A2P11168 524 aaPredicted RBP17.42■□□□□ 0.38
KCNC4-204ENST00000438661 HLA-DMAP28067 261 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms