RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 OR2T5Q6IEZ7 315 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 CAPN13Q6MZZ7 669 aaPredicted RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 FBXO46Q6PJ61 603 aaPredicted RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 ZNF773Q6PK81 442 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 TSEN54Q7Z6J9 526 aaKnown RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 CCDC71Q8IV32 467 aaPredicted RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 ZC3H7AQ8IWR0 971 aaKnown RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 OR2T29Q8NH02 315 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 ADAMTS16Q8TE57 1224 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 OR8D1Q8WZ84 308 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 PLA2G2FQ9BZM2 168 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 CHST8Q9H2A9 424 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 IL1RAPQ9NPH3 570 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 DMRT3Q9NQL9 472 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 MBNL1Q9NR56 388 aaKnown RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 PNMA8BQ9ULN7 279 aaPredicted RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 SAMHD1Q9Y3Z3 626 aaKnown RBP12.19□□□□□ -0.46
HCG18-236ENST00000438412 PCDHB11Q9Y5F2 797 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 SNX11Q9Y5W9 270 aa12.19□□□□□ -0.46
HCG18-236ENST00000438412 PRAMEF25A6NGN4 478 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 J3KTA2 159 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 M0R129 80 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 BCKDKO14874 412 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 UGDHO60701 494 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 TFPTP0C1Z6 253 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 MAGEA2P43356 314 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 MAP2K4P45985 399 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 MVDP53602 400 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 EMP3P54852 163 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 ELAVL3Q14576 367 aaKnown RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 RGNQ15493 299 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 ERI1Q8IV48 349 aaKnown RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 SPARTQ8N0X7 666 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 SMYD1Q8NB12 490 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 ZNF555Q8NEP9 628 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 OR9A1PQ8NGU1 263 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 ZFP90Q8TF47 636 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 ATL1Q8WXF7 558 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 OTUB2Q96DC9 234 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 FAM83CQ9BQN1 747 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 RPP25Q9BUL9 199 aaKnown RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 OSBPL6Q9BZF3 934 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 TAC3Q9UHF0 121 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 PLEKHM1Q9Y4G2 1056 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 TESMINQ9Y4I5 508 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 NUP210Q8TEM1 1887 aaPredicted RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 RFXAPO00287 272 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 SLC1A7O00341 560 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 FGF19O95750 216 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 FUCA1P04066 466 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 FABP3P05413 133 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 IL3P08700 152 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 HNRNPA1P09651 372 aaKnown RBP eCLIP12.18□□□□□ -0.46
HCG18-236ENST00000438412 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 ALDH4A1P30038 563 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 HOXA9P31269 272 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 MLLT10P55197 1068 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 KCNC3Q14003 757 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 AP1ARQ63HQ0 302 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 SYNPOQ8N3V7 929 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 SLC5A11Q8WWX8 675 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 HSPBAP1Q96EW2 488 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 TMEM245Q9H330 911 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 RLIMQ9NVW2 624 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 TUBA8Q9NY65 449 aaPredicted RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 NFKBIL1Q9UBC1 381 aaPredicted RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 SPASTQ9UBP0 616 aa12.18□□□□□ -0.46
HCG18-236ENST00000438412 SAMD4AQ9UPU9 718 aaKnown RBP12.18□□□□□ -0.46
HCG18-236ENST00000438412 SCN2AQ99250 2005 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 NPIPB8E9PQR5 432 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 MID1O15344 667 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 MYO1DO94832 1006 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 SEMG1P04279 462 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 ACADLP28330 430 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 TRPC1P48995 793 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 PLA2G16P53816 162 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 PNLIPRP1P54315 467 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 HPCAP84074 193 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 C2orf80Q0P641 193 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 IQCCQ4KMZ1 466 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 ZNF691Q5VV52 312 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 TTC23LQ6PF05 361 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 SHQ1Q6PI26 577 aaKnown RBP12.17□□□□□ -0.46
HCG18-236ENST00000438412 OLIG3Q7RTU3 272 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 HMGN2P46Q86SG4 172 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 RNF130Q86XS8 419 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 GALNT13Q8IUC8 556 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 AMER3Q8N944 861 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 TERB1Q8NA31 727 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 OR13F1Q8NGS4 319 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 XKR8Q9H6D3 395 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 PRSS16Q9NQE7 514 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
HCG18-236ENST00000438412 FAF1Q9UNN5 650 aaPredicted RBP12.17□□□□□ -0.46
HCG18-236ENST00000438412 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 SLC27A6Q9Y2P4 619 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 SCN3AQ9NY46 2000 aa12.17□□□□□ -0.46
HCG18-236ENST00000438412 EDDM13A0A1B0GTR0 161 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms