RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TTLL4Q14679 1199 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 INO80DQ53TQ3 878 aaPredicted RBP10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 ZBTB37Q5TC79 503 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 ASB18Q6ZVZ8 466 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 ZSWIM9Q86XI8 627 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 RGL4Q8IZJ4 473 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF680Q8NEM1 530 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 RHEBL1Q8TAI7 183 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 CEP76Q8TAP6 659 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 NPLOC4Q8TAT6 608 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 HRASLS5Q96KN8 279 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 SEMA3CQ99985 751 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 ERVMER34-1Q9H9K5 563 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 BEX1Q9HBH7 125 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 CPNE7Q9UBL6 633 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 TLR6Q9Y2C9 796 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 TNPO3Q9Y5L0 923 aaKnown RBP10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 TRAV6A0A075B6T7 132 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 HNRNPCL2B2RXH8 293 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 STX7O15400 261 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 MRPL19P49406 292 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 CDH12P55289 794 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 LARS2Q15031 903 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 SNAPC1Q16533 368 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 LEXMQ3ZCV2 418 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 MARC1Q5VT66 337 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 PSAPL1Q6NUJ1 521 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 ARSKQ6UWY0 536 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 ARMCX2Q7L311 632 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 RDH10Q8IZV5 341 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 TTLQ8NG68 377 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 QRFPRQ96P65 431 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 SMAD5Q99717 465 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 HEBP1Q9NRV9 189 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 OLA1Q9NTK5 396 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 ING3Q9NXR8 418 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 KLHL21Q9UJP4 597 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 NEU3Q9UQ49 428 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 CMAHPQ9Y471 501 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 MROH6A6NGR9 719 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 RFXANKO14593 260 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 GPR182O15218 404 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 ALPPP05187 535 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 SMPD1P17405 629 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 RPL34P49207 117 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 RORCP51449 518 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 STC1P52823 247 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 RAB8AP61006 207 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 SCAPQ12770 1279 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 HDDC2Q7Z4H3 204 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 AADATQ8N5Z0 425 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 PAF1Q8N7H5 531 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 ZFP41Q8N8Y5 198 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 OR11H4Q8NGC9 324 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 FCGR1BQ92637 280 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 TESCQ96BS2 214 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 ZIC5Q96T25 663 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 EGFL8Q99944 293 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 RRAGCQ9HB90 399 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 HHATLQ9HCP6 504 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 C11orf16Q9NQ32 467 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 DNAJC27Q9NZQ0 273 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 CCDC88CQ9P219 2028 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 REV1Q9UBZ9 1251 aa10.89□□□□□ -0.67
SEC61A1-202ENST00000424880 ISM1B1AKI9 464 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SOX14O95416 240 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 C1QBP02746 253 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ESR1P03372 595 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SCNN1AP37088 669 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 BAMBIQ13145 260 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 GTF2H2Q13888 395 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 KYAT1Q16773 422 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ALFQ53S48 1182 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 GTF2H2CQ6P1K8 395 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 FAM124AQ86V42 546 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 CLECL1Q8IZS7 167 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 GHDCQ8N2G8 530 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 BMPERQ8N8U9 685 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF578Q96N58 590 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 TSGA13Q96PP4 275 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SCPEP1Q9HB40 452 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SERHLQ9NQF3 203 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 KCNE2Q9Y6J6 123 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 PLXNA1Q9UIW2 1896 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 DNAJC25-GNG10A0A024R161 153 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 PCDH17O14917 1159 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 C9P02748 559 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ENGP17813 658 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SDC2P34741 201 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 TAF6P49848 677 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 INSL4Q14641 139 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 RNASE12Q5GAN4 147 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 DGKKQ5KSL6 1271 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SDHAF4Q5VUM1 108 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 TYW3Q6IPR3 259 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 TIGD7Q6NT04 549 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 TEX261Q6UWH6 196 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms