RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 UBE2E3Q969T4 207 aa12.69□□□□□ -0.38
TMEM248-203ENST00000418375 COL26A1Q96A83 441 aa12.69□□□□□ -0.38
TMEM248-203ENST00000418375 FKBP10Q96AY3 582 aa12.69□□□□□ -0.38
TMEM248-203ENST00000418375 ZNF304Q9HCX3 659 aa12.69□□□□□ -0.38
TMEM248-203ENST00000418375 PRM3Q9NNZ6 103 aa12.69□□□□□ -0.38
TMEM248-203ENST00000418375 RRAGDQ9NQL2 400 aaPredicted RBP12.69□□□□□ -0.38
TMEM248-203ENST00000418375 COPG2Q9UBF2 871 aa12.69□□□□□ -0.38
TMEM248-203ENST00000418375 GRID1Q9ULK0 1009 aa12.69□□□□□ -0.38
TMEM248-203ENST00000418375 MRPS18BQ9Y676 258 aaKnown RBP12.69□□□□□ -0.38
TMEM248-203ENST00000418375 HEATR5BQ9P2D3 2071 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 TENM4Q6N022 2769 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 URADA6NGE7 173 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ANKDD1BA6NHY2 528 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 A8MT66 165 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 FOXO6A8MYZ6 492 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 E2F3O00716 465 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 SIX3O95343 332 aaPredicted RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 WISP1O95388 367 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 MED26O95402 600 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ALBP02768 609 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CAPN1P07384 714 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 PRKAR1AP10644 381 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 FBLP22087 321 aaKnown RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ATP5F1P24539 256 aaPredicted RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 HPDP32754 393 aaPredicted RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CRHR1P34998 444 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CASP2P42575 452 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CCR10P46092 362 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 OR1D4P47884 311 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 AVPR1BP47901 424 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 POLE2P56282 527 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 KCNC4Q03721 635 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CDC20Q12834 499 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 KCNAB2Q13303 367 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 SLC9A5Q14940 896 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CCDC153Q494R4 210 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ATG14Q6ZNE5 492 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 OVCH1Q7RTY7 1134 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 GOLGA7Q7Z5G4 137 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CROCCP2Q86T23 111 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 SLC22A9Q8IVM8 553 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 TMEM151AQ8N4L1 468 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 METTL27Q8N6F8 245 aaPredicted RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ANKRD53Q8N9V6 530 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ZCCHC10Q8TBK6 192 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ATP6V1E2Q96A05 226 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 MMABQ96EY8 250 aaPredicted RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 MACROD1Q9BQ69 325 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 IQCGQ9H095 443 aaKnown RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 CLMPQ9H6B4 373 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ACTR8Q9H981 624 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 ANKHQ9HCJ1 492 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 NXT1Q9UKK6 140 aaKnown RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 TCFL5Q9UL49 500 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 SLC22A7Q9Y694 548 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 MAU2Q9Y6X3 613 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 BOD1L1Q8NFC6 3051 aa12.68□□□□□ -0.38
TMEM248-203ENST00000418375 FLNBO75369 2602 aaKnown RBP12.68□□□□□ -0.38
TMEM248-203ENST00000418375 SPTA1P02549 2419 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 A0A0A6YYC8 382 aaPredicted RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 LRRC14BA6NHZ5 514 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 H0YIG0 161 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 I3L1I5 382 aaPredicted RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SUV39H1O43463 412 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 FOXS1O43638 330 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 UGDHO60701 494 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 PRAMEF4O60810 478 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 WFS1O76024 890 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SERPINA6P08185 405 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SBK3P0C264 359 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 ITGAXP20702 1163 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 ARL1P40616 181 aaPredicted RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 HNF4AP41235 474 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 FOLR3P41439 243 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 STXBP1P61764 594 aaKnown RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SKP1P63208 163 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 OCA2Q04671 838 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SLC18A2Q05940 514 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 ZNF844Q08AG5 666 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 DSG2Q14126 1118 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 E2F2Q14209 437 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 HERC3Q15034 1050 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 PRAMEF9Q5VWM5 478 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 LIPJQ5W064 366 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 GRHL2Q6ISB3 625 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 NIPAL1Q6NVV3 410 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 MED27Q6P2C8 311 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 ABHD13Q7L211 337 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 TRABD2AQ86V40 505 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 MYLK4Q86YV6 388 aaPredicted RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SRRM1Q8IYB3 904 aaKnown RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 IQCKQ8N0W5 287 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 C4orf33Q8N1A6 199 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 KCT2Q8NC54 265 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 PPP4R1Q8TF05 950 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms