RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 NKD1Q969G9 470 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 FKBP10Q96AY3 582 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ARL8AQ96BM9 186 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SMIM10Q96HG1 83 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 CNDP1Q96KN2 507 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 EFHD1Q9BUP0 239 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SLC29A3Q9BZD2 475 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 DRC3Q9H069 523 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SLC26A1Q9H2B4 701 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 C12orf65Q9H3J6 166 aaKnown RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 SEMA4BQ9NPR2 832 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ZNF446Q9NWS9 450 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ZNF225Q9UK10 706 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 ACACAQ13085 2346 aa11.35□□□□□ -0.59
ATG4B-207ENST00000415107 CHD8Q9HCK8 2581 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 FER1L5A0AVI2 2057 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 IGLV3-12A0A075B6K2 115 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 TMEM120BA0PK00 339 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 LRIT2A6NDA9 550 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 ANKDD1BA6NHY2 528 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 NDUFS4O43181 175 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 SCELO95171 688 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 RECKO95980 971 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 ALBP02768 609 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 KLK3P07288 261 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-207ENST00000415107 SPTBP11277 2137 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 HSD3B1P14060 373 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 HSD3B2P26439 372 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 ALDH3A1P30838 453 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 EIF2S3P41091 472 aaKnown RBP11.34□□□□□ -0.59
ATG4B-207ENST00000415107 NAGLUP54802 743 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 STXBP1P61764 594 aaKnown RBP11.34□□□□□ -0.59
ATG4B-207ENST00000415107 PHEXP78562 749 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 CLN3Q13286 438 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 HERC3Q15034 1050 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 TTMPQ5BVD1 217 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 LETMD1Q6P1Q0 360 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 FAM198BQ6UWH4 519 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 ZFAND4Q86XD8 727 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 GOLGA6L1Q8N7Z2 621 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 OR4F6Q8NGB9 312 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 KCNE4Q8WWG9 221 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 ATP6V1E2Q96A05 226 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 GAL3ST3Q96A11 431 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 GATA5Q9BWX5 397 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-207ENST00000415107 MS4A8Q9BY19 250 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 GPR87Q9BY21 358 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 TXLNGQ9NUQ3 528 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 PADI1Q9ULC6 663 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 CDC14AQ9UNH5 594 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 RNF11Q9Y3C5 154 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 IGF2RP11717 2491 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 FRYQ5TBA9 3013 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
ATG4B-207ENST00000415107 SEC16AO15027 2179 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 A0A1B0GTL3 188 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 FOXS1O43638 330 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 SEMA3DO95025 777 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 NTRK1P04629 796 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CAPN1P07384 714 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CYC1P08574 325 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CCNYL3P0C7X3 344 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 PIM1P11309 404 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 ALOX12P18054 663 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 ITGAXP20702 1163 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 AGXTP21549 392 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CDH13P55290 713 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 DCDP81605 110 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CUL3Q13618 768 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 DSG2Q14126 1118 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 RBBP5Q15291 538 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 ZRSR2Q15696 482 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 TMEM35AQ53FP2 167 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CFAP157Q5JU67 520 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 PRAMEF17Q5VTA0 474 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 FRG2Q64ET8 278 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 MRPL14Q6P1L8 145 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 TTLL10Q6ZVT0 673 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 MILR1Q7Z6M3 343 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CACNA2D3Q8IZS8 1091 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 KIRREL3Q8IZU9 778 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 GALNT6Q8NCL4 622 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 SRFBP1Q8NEF9 429 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 HUS1BQ8NHY5 278 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 RAB3IL1Q8TBN0 382 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 UTP15Q8TED0 518 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 TRPC4APQ8TEL6 797 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 MS4A6EQ96DS6 147 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 CLIP3Q96DZ5 547 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 FRG2BQ96QU4 278 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 SLC7A5P2Q9GIP4 190 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 WDR54Q9H977 334 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 BRF2Q9HAW0 419 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 DMRT3Q9NQL9 472 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 IRAK4Q9NWZ3 460 aa11.33□□□□□ -0.6
ATG4B-207ENST00000415107 NXT1Q9UKK6 140 aaKnown RBP11.33□□□□□ -0.6
ATG4B-207ENST00000415107 ACACBO00763 2458 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms