RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 NXPE2Q96DL1 559 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 TEX13AQ9BXU3 409 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 KRT23Q9C075 422 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 ABCG4Q9H172 646 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 NDUFA13Q9P0J0 144 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 IL36AQ9UHA7 158 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 MAN1B1Q9UKM7 699 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 FOXA2Q9Y261 457 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 KIAA1210Q9ULL0 1709 aa4.29□□□□□ -1.72
HMGB3P31-201ENST00000413333 TRBV2A0A0J9YWF9 115 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 TMEM129A0AVI4 362 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC15A5A6NIM6 579 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 CDK2AP2O75956 126 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 RAF1P04049 648 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 EDN1P05305 212 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 F7P08709 466 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 RBMS1P29558 406 aaKnown RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 CD86P42081 329 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 RABIFP47224 123 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 HUNKP57058 714 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 ERVFC1-1P60608 527 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 ARL16Q0P5N6 197 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 TRIM29Q14134 588 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 TTC31Q49AM3 519 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 DNAJC21Q5F1R6 531 aaKnown RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 MFSD7Q6UXD7 560 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 SH2D5Q6ZV89 423 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 CATSPER4Q7RTX7 472 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 COX8CQ7Z4L0 72 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZC3H3Q8IXZ2 948 aaKnown RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 BATF2Q8N1L9 274 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 HDDC3Q8N4P3 179 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 ANKRD20A12PQ8NF67 263 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 GPRC5AQ8NFJ5 357 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 KIAA1524Q8TCG1 905 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 HPSE2Q8WWQ2 592 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 SEPT8Q92599 483 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 SENP5Q96HI0 755 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 MARK4Q96L34 752 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 NEDD4LQ96PU5 975 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 EPYCQ99645 322 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 PKP2Q99959 881 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 PIGQQ9BRB3 760 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 WACQ9BTA9 647 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 DDX47Q9H0S4 455 aaKnown RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 TSPYL1Q9H0U9 437 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 MTIF3Q9H2K0 278 aaKnown RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 GPN1Q9HCN4 374 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 SIX2Q9NPC8 291 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 TBC1D13Q9NVG8 400 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 SPASTQ9UBP0 616 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 PSORS1C1Q9UIG5 152 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 GRID1Q9ULK0 1009 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 KCNJ14Q9UNX9 436 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 PPP2R2CQ9Y2T4 447 aa4.28□□□□□ -1.72
HMGB3P31-201ENST00000413333 TRBV4-1A0A0J9YWV2 114 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 A8MVM7 634 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 TRMUO75648 421 aaKnown RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 CXCL14O95715 111 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 MT-ND2P03891 347 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 PRKAR1AP10644 381 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 ETS1P14921 441 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 AREGP15514 252 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 PAX1P15863 534 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 ELAVL4P26378 380 aaKnown RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 GJB2P29033 226 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 SFNP31947 248 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 CDKN1AP38936 164 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 ATXN3P54252 364 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 FOXG1P55316 489 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 EVCP57679 992 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 SRP54P61011 504 aaKnown RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 POLR2FP61218 127 aaKnown RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 POU3F1Q03052 451 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 ILF3Q12906 894 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 PPP1R8Q12972 351 aaKnown RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 GK2Q14410 553 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 GTDC1Q4AE62 458 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 PDLIM3Q53GG5 364 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 XKR6Q5GH73 641 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 FGD3Q5JSP0 725 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 WBP2NLQ6ICG8 309 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 B3GLCTQ6Y288 498 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 ADAMTSL2Q86TH1 951 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 ERC1Q8IUD2 1116 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 FBXW8Q8N3Y1 598 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 RFLNBQ8N5W9 214 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 TCEANCQ8N8B7 351 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 KLHDC9Q8NEP7 349 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 OR4A16Q8NH70 328 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 SUSD6Q92537 303 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 HAS2Q92819 552 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM111AQ96PZ2 611 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 UBAC1Q9BSL1 405 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 NTMT1Q9BV86 223 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 THAP2Q9H0W7 228 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 CARD9Q9H257 536 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 UBQLN2Q9UHD9 624 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 PRDM4Q9UKN5 801 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms