RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 HAPLN1P10915 354 aaPredicted RBP4.73□□□□□ -1.65
LSM5-206ENST00000409987 FGF3P11487 239 aaPredicted RBP4.73□□□□□ -1.65
LSM5-206ENST00000409987 FUT1P19526 365 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 GLRA2P23416 452 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 DGKAP23743 735 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 PSMA5P28066 241 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 TRPC1P48995 793 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 CCNA1P78396 465 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 COX10Q12887 443 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 CUL3Q13618 768 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 CA9Q16790 459 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 ATAD3BQ5T9A4 648 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 DLEU7Q6UYE1 221 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 ANO5Q75V66 913 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 ZNF573Q86YE8 665 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 BMPERQ8N8U9 685 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 FAM133AQ8N9E0 248 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 OLIG1Q8TAK6 271 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 ZNF473Q8WTR7 871 aaKnown RBP4.73□□□□□ -1.65
LSM5-206ENST00000409987 IRGQQ8WZA9 623 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 SLCO4A1Q96BD0 722 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 ZNF583Q96ND8 569 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 TRAF4Q9BUZ4 470 aaPredicted RBP4.73□□□□□ -1.65
LSM5-206ENST00000409987 ATG10Q9H0Y0 220 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 NCOR1P1Q9H4R4 102 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 FAM153AQ9UHL3 310 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 FOXA2Q9Y261 457 aaPredicted RBP4.73□□□□□ -1.65
LSM5-206ENST00000409987 ASB3Q9Y575 518 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 SYNJ2O15056 1496 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 FAM230AA0A1W2PPH8 454 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CXCL11O14625 94 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CASQ2O14958 399 aaPredicted RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 CYTIPO60759 359 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PCCBP05166 539 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CCDC159P0C7I6 412 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 EPCAMP16422 314 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 UGT1A6P19224 532 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 MSH3P20585 1137 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CCNCP24863 283 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PIK3R1P27986 724 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PKLRP30613 574 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CDX1P47902 265 aaPredicted RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 BEX3Q00994 111 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 IL24Q13007 206 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 ZKSCAN8Q15776 578 aaPredicted RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 CTU2Q2VPK5 515 aaKnown RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 PHLDA2Q53GA4 152 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 ELFN2Q5R3F8 820 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PDSS1Q5T2R2 415 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CYP4A22Q5TCH4 519 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 SPSB3Q6PJ21 355 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CORO6Q6QEF8 472 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PRSS55Q6UWB4 352 aaPredicted RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 B3GLCTQ6Y288 498 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 FOXL2NBQ6ZUU3 175 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 POC1AQ8NBT0 407 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 KIAA0895Q8NCT3 520 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 OR2T12Q8NG77 320 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 OR56B2PQ8NGI1 322 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 OR56B1Q8NGI3 324 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CCDC107Q8WV48 283 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CCDC51Q96ER9 411 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 NECTIN4Q96NY8 510 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 RAD9AQ99638 391 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 ZNF559Q9BR84 538 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 POLR1EQ9GZS1 481 aaKnown RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 DNAJC4Q9NNZ3 241 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PALMDQ9NP74 551 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 A4GALTQ9NPC4 353 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 ZCCHC3Q9NUD5 404 aaKnown RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 CLIP2Q9UDT6 1046 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PTBP2Q9UKA9 531 aaKnown RBP4.72□□□□□ -1.65
LSM5-206ENST00000409987 SNX6Q9UNH7 406 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 PLA2G4CQ9UP65 541 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 CFTRP13569 1480 aa4.72□□□□□ -1.65
LSM5-206ENST00000409987 GAPVD1Q14C86 1478 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 A0A1B0GUV1 79 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 MACROD2A1Z1Q3 448 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 H0YIG0 161 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 C16orf97H3BN30 126 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 PRAF2O60831 178 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 RNASEH1O60930 286 aaKnown RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 ADCY5O95622 1261 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 HSPA8P11142 646 aaKnown RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 ZNF18P17022 549 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 CYP2A7P20853 494 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 HNRNPA2B1P22626 353 aaKnown RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 JAK1P23458 1154 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 GDI1P31150 447 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 CASQ1P31415 396 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 SLC6A12P48065 614 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 DHPSP49366 369 aaPredicted RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 HOXA1P49639 335 aaPredicted RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 CNN1P51911 297 aaKnown RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 MTTPP55157 894 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 B3GALT5-AS1P59052 145 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 ABRQ12979 859 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 CUL2Q13617 745 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 VEZF1Q14119 521 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms