RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CREB3L4Q8TEY5 395 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 CCT6BQ92526 530 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 CDK15Q96Q40 435 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 CCNL2Q96S94 520 aaPredicted RBP18.27■□□□□ 0.52
HOXA9-202ENST00000396345 DRC3Q9H069 523 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 RHBGQ9H310 441 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 VIPAS39Q9H9C1 493 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 GPN2Q9H9Y4 310 aaPredicted RBP18.27■□□□□ 0.52
HOXA9-202ENST00000396345 PRM3Q9NNZ6 103 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 MRPS2Q9Y399 296 aaKnown RBP18.27■□□□□ 0.52
HOXA9-202ENST00000396345 RNF11Q9Y3C5 154 aa18.27■□□□□ 0.52
HOXA9-202ENST00000396345 FER1L5A0AVI2 2057 aa18.27■□□□□ 0.51
HOXA9-202ENST00000396345 OTCP00480 354 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 SERPINA6P08185 405 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 PCNAP12004 261 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 LIFP15018 202 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 ITGAXP20702 1163 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 OR1D4P47884 311 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 NAGLUP54802 743 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 NAA20P61599 178 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 TRAF3Q13114 568 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 SRSF6Q13247 344 aaKnown RBP18.26■□□□□ 0.51
HOXA9-202ENST00000396345 FAM53BQ14153 422 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 LIPMQ5VYY2 423 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 PRMT9Q6P2P2 845 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 LAS2Q8IYD9 372 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 ZCCHC10Q8TBK6 192 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 EFHD1Q9BUP0 239 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 KCNK9Q9NPC2 374 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 CDC14AQ9UNH5 594 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 SSUH2Q9Y2M2 353 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 PCDHGA11Q9Y5H2 935 aa18.26■□□□□ 0.51
HOXA9-202ENST00000396345 SRRM3A6NNA2 597 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-202ENST00000396345 C21orf140B9A014 251 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 C9J4A7 227 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 H0YIV9 168 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 PPP6CO00743 305 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 CLEC3AO75596 197 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 PIM1P11309 404 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-202ENST00000396345 ITPKBP27987 946 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 AVPR1BP47901 424 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 TLE3Q04726 772 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 ASPHQ12797 758 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 HYAL2Q12891 473 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 DNASE1L3Q13609 305 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 SLC9A5Q14940 896 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 CPSF6Q16630 551 aaKnown RBP eCLIP18.25■□□□□ 0.51
HOXA9-202ENST00000396345 CFAP157Q5JU67 520 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 ADNP2Q6IQ32 1131 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 FAM198BQ6UWH4 519 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 VN1R5Q7Z5H4 357 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 OR7G3Q8NG95 312 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 OR4F6Q8NGB9 312 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-202ENST00000396345 TLCD1Q96CP7 247 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 REPS1Q96D71 796 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 MVB12AQ96EY5 273 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 MAGEB10Q96LZ2 347 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-202ENST00000396345 C17orf62Q9BQA9 187 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 SLC6A16Q9GZN6 736 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 GSTO2Q9H4Y5 243 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 ZNF304Q9HCX3 659 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 IFT80Q9P2H3 777 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-202ENST00000396345 GPN3Q9UHW5 284 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-202ENST00000396345 KCND3Q9UK17 655 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 SLC22A7Q9Y694 548 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 MAU2Q9Y6X3 613 aa18.25■□□□□ 0.51
HOXA9-202ENST00000396345 A0A0A6YYC8 382 aaPredicted RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 URADA6NGE7 173 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 I3L1I5 382 aaPredicted RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 TERTO14746 1132 aaKnown RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 TM9SF1O15321 606 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 PRPF4O43172 522 aaKnown RBP eCLIP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 FOXS1O43638 330 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 TRIM13O60858 407 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 MLYCDO95822 493 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ONECUT2O95948 504 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 CAPN1P07384 714 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 RAB40ALP0C0E4 278 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 F8A1P23610 371 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 SERPINB1P30740 379 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ALDH3A1P30838 453 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 MAGOHP61326 146 aaKnown RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 STXBP1P61764 594 aaKnown RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 RPS15P62841 145 aaKnown RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 SNRPNP63162 240 aaKnown RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 LCP2Q13094 533 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 HERC3Q15034 1050 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ZRSR2Q15696 482 aaKnown RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 GGTA1PQ4G0N0 100 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 TOR1AIP1Q5JTV8 583 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ARHGAP40Q5TG30 622 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 AGBL2Q5U5Z8 902 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 MLIPQ5VWP3 458 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ABHD13Q7L211 337 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 COL26A1Q96A83 441 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 MMABQ96EY8 250 aaPredicted RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ZNF382Q96SR6 550 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 MECRQ9BV79 373 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 GPR87Q9BY21 358 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms