RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LRRC38Q5VT99 294 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 FBXW10Q5XX13 1052 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 PSD4Q8NDX1 1056 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 OR2M7Q8NG81 312 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 SMPDL3BQ92485 455 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 PIGTQ969N2 578 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 SECISBP2Q96T21 854 aaKnown RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 ACAT2Q9BWD1 397 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 MRPS30Q9NP92 439 aaKnown RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 SPATA7Q9P0W8 599 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 LCMT1Q9UIC8 334 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 PCDHGB3Q9Y5G1 929 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 NPFFR2Q9Y5X5 522 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 BZW2Q9Y6E2 419 aaKnown RBP12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
VCPKMT-201ENST00000395859 RAI1Q7Z5J4 1906 aaPredicted RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 MROH6A6NGR9 719 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 FAM166BA8MTA8 275 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 IQCF5A8MTL0 148 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 SUSD5O60279 629 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 CST8O60676 142 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 CNOT4O95628 575 aaKnown RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 TUBB4AP04350 444 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 PKMP14618 531 aaKnown RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 PSMB4P28070 264 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 CYLC1P35663 651 aaPredicted RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 OR4D2P58180 307 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 PRDX1Q06830 199 aaKnown RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 NDUFA9Q16795 377 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 HYAL4Q2M3T9 481 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 HEPHL1Q6MZM0 1159 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 TMEM214Q6NUQ4 689 aaKnown RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 ALKBH5Q6P6C2 394 aaKnown RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 CNGA4Q8IV77 575 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 LRRC8AQ8IWT6 810 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 APCDD1LQ8NCL9 501 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 STYXQ8WUJ0 223 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 RERGQ96A58 199 aaPredicted RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 TBL1YQ9BQ87 522 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 TRMT1Q9NXH9 659 aaKnown RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 JKAMPQ9P055 326 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 CTTNBP2NLQ9P2B4 639 aa12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 ZNF629Q9UEG4 869 aaPredicted RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 AAR2Q9Y312 384 aaKnown RBP12.71□□□□□ -0.37
VCPKMT-201ENST00000395859 EML6Q6ZMW3 1958 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 HACD1B0YJ81 288 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 SGK494L7N484 410 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 FCHO1O14526 889 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 DVL2O14641 736 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 HAT1O14929 419 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 PHF1O43189 567 aaPredicted RBP12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 SOX30O94993 753 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 IFNA2P01563 188 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 KRT1P04264 644 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 CELA3AP09093 270 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 GABRA1P14867 456 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 IL1RNP18510 177 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 BMP5P22003 454 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 TBX2Q13207 712 aaPredicted RBP12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 POU4F3Q15319 338 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 TYSND1Q2T9J0 566 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 SLC22A16Q86VW1 577 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 HIPK1Q86Z02 1210 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 TMEM251Q8N6I4 163 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 SYN2Q92777 582 aaPredicted RBP12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 CCDC138Q96M89 665 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 NAP1L5Q96NT1 182 aaPredicted RBP12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 C10orf88Q9H8K7 445 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 TIMMDC1Q9NPL8 285 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 SPRR3Q9UBC9 169 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 MTRF1LQ9UGC7 380 aaKnown RBP12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 PCYOX1Q9UHG3 505 aa12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 TTC7AQ9ULT0 858 aaPredicted RBP12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 RUVBL2Q9Y230 463 aaKnown RBP12.7□□□□□ -0.38
VCPKMT-201ENST00000395859 PKD1L1Q8TDX9 2849 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 KCNE1BA0A087WTH5 132 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 CCDC162PA2VCL2 907 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 SAGE2PA6NJ88 616 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 KDM4EB2RXH2 506 aaPredicted RBP12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ACOT7O00154 380 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ITGA10O75578 1167 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 CDC123O75794 336 aaPredicted RBP12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 IL10P22301 178 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 RBL1P28749 1068 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 CCNFP41002 786 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 MAGEA5P43359 124 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 FOXO1Q12778 655 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 TFDP2Q14188 446 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 SPARCL1Q14515 664 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 KRTAP24-1Q3LI83 254 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 NDUFAF5Q5TEU4 345 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ICE2Q659A1 982 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 KCTD11Q693B1 232 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ITPRIPL1Q6GPH6 555 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 TTC23LQ6PF05 361 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 SUSD1Q6UWL2 747 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 KIF18BQ86Y91 864 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms