RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 SYCE2Q6PIF2 218 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 MRPL10Q7Z7H8 261 aaKnown RBP15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 SYNPOQ8N3V7 929 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 CAMKK1Q8N5S9 505 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 DENND6BQ8NEG7 585 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 SETD6Q8TBK2 473 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 TRIM63Q969Q1 353 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 MTERF1Q99551 399 aaKnown RBP15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 SLA2Q9H6Q3 261 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 SLC22A14Q9Y267 594 aa15.82■□□□□ 0.12
EFEMP1-202ENST00000394555 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 MYADML2A6NDP7 307 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ZSCAN5BA6NJL1 495 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ADAMDEC1O15204 470 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PCDH7O60245 1069 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ACSL4O60488 711 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ICMTO60725 284 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 GABRB1P18505 474 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PSMA3P25788 255 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 SSTR4P31391 388 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 HMGCLP35914 325 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 RUNX1T1Q06455 604 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ZNF177Q13360 481 aaPredicted RBP15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PTGES3Q15185 160 aaKnown RBP15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 GPRC6AQ5T6X5 926 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 CXCL17Q6UXB2 119 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 FAM9CQ8IZT9 166 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PGBD3Q8N328 593 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 BHMTQ93088 406 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 RNF170Q96K19 258 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 TCF25Q9BQ70 676 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 RHCGQ9UBD6 479 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 POFUT2Q9Y2G5 429 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 FCF1Q9Y324 198 aaKnown RBP15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 DOCK3Q8IZD9 2030 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 E9PQ18 207 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PCDH17O14917 1159 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 P2RX3P56373 397 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PURAQ00577 322 aaKnown RBP15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 SCN1BQ07699 218 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 NFATC2Q13469 925 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 EIF4HQ15056 248 aaKnown RBP15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ZXDCQ2QGD7 858 aaPredicted RBP15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 YIF1BQ5BJH7 314 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 NLRP8Q86W28 1048 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 SLC34A3Q8N130 599 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 GRPEL2Q8TAA5 225 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 SLC16A10Q8TF71 515 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ATG10Q9H0Y0 220 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 CLEC2DQ9UHP7 191 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 TRAPPC4Q9Y296 219 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 SCN2BO60939 215 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 MYL9P24844 172 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 HOXC5Q00444 222 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 HSPA14Q0VDF9 509 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PTCHD3Q3KNS1 767 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 CTXN3Q4LDR2 81 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 VN1R5Q7Z5H4 357 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 ELMOD2Q8IZ81 293 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 RASSF5Q8WWW0 418 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 IL26Q9NPH9 171 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 NMRK2Q9NPI5 230 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 PCDHB11Q9Y5F2 797 aa15.81■□□□□ 0.12
EFEMP1-202ENST00000394555 A0A075B6Q4 140 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 ZNF865P0CJ78 1059 aaPredicted RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 IRF1P10914 325 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 IFI30P13284 250 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 ANXA8P13928 327 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 ITGALP20701 1170 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 RORCP51449 518 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 CDH4P55283 916 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 CDC42P60953 191 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 SNRPD2P62316 118 aaKnown RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 SRSF11Q05519 484 aaKnown RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 VEZF1Q14119 521 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 KRT73Q86Y46 540 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 TRMT61AQ96FX7 289 aaKnown RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 SLC22A4Q9H015 551 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 C11orf54Q9H0W9 315 aaPredicted RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 C3orf14Q9HBI5 128 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 SNX7Q9UNH6 387 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 DNMT3AQ9Y6K1 912 aaPredicted RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 A0A0U1RQF3 1178 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 H3BNC9 293 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 TMCC2O75069 709 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 CLDN7O95471 211 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 TRBC1P01850 177 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 GKP32189 559 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 FEN1P39748 380 aaKnown RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 RHOAP61586 193 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 ARF5P84085 180 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 HYAL2Q12891 473 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 MICAQ29983 383 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 FRG2Q64ET8 278 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 SIGIRRQ6IA17 410 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 UBE2R2Q712K3 238 aaPredicted RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 GTF3C2Q8WUA4 911 aaPredicted RBP15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 OPALINQ96PE5 141 aa15.8■□□□□ 0.12
EFEMP1-202ENST00000394555 VPS35Q96QK1 796 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms