RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NAGLUP54802 743 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 RGS1Q08116 209 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 COL9A2Q14055 689 aaPredicted RBP17.82■□□□□ 0.44
SSU72-203ENST00000378725 PCLAFQ15004 111 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 GGTA1PQ4G0N0 100 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 LIPMQ5VYY2 423 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 MILR1Q7Z6M3 343 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 C10orf107Q8IVU9 208 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 AFAP1L2Q8N4X5 818 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 DTWD1Q8N5C7 304 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 OR7G3Q8NG95 312 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 TRPC4APQ8TEL6 797 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 SMIM10Q96HG1 83 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 MAGEB10Q96LZ2 347 aaPredicted RBP17.82■□□□□ 0.44
SSU72-203ENST00000378725 C17orf62Q9BQA9 187 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 GPR87Q9BY21 358 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 GSTO2Q9H4Y5 243 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 ACSS2Q9NR19 701 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 NDOR1Q9UHB4 597 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 ADGRE2Q9UHX3 823 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 ZNF225Q9UK10 706 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 CDC14AQ9UNH5 594 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 PCDHGA11Q9Y5H2 935 aa17.82■□□□□ 0.44
SSU72-203ENST00000378725 A0A1B0GTL3 188 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 LRIT2A6NDA9 550 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 TRIM13O60858 407 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 MLYCDO95822 493 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 SERPIND1P05546 499 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 TSPAN8P19075 237 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 ITPKBP27987 946 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 SERPINB1P30740 379 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 ALDH3A1P30838 453 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 DLSTP36957 453 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 CYP4F2P78329 520 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 SRSF6Q13247 344 aaKnown RBP17.81■□□□□ 0.44
SSU72-203ENST00000378725 DNASE1L3Q13609 305 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 ADPRMQ3LIE5 342 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 ADNP2Q6IQ32 1131 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 FAM198BQ6UWH4 519 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 VASH2Q86V25 355 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 OR4F6Q8NGB9 312 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 ZNF473Q8WTR7 871 aaKnown RBP17.81■□□□□ 0.44
SSU72-203ENST00000378725 KIAA1143Q96AT1 154 aaPredicted RBP17.81■□□□□ 0.44
SSU72-203ENST00000378725 PKNOX2Q96KN3 472 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 CDK15Q96Q40 435 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 ZNF382Q96SR6 550 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 AICDAQ9GZX7 198 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 DRC3Q9H069 523 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 KLHL31Q9H511 634 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 GPN2Q9H9Y4 310 aaPredicted RBP17.81■□□□□ 0.44
SSU72-203ENST00000378725 ZNF304Q9HCX3 659 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 KCND3Q9UK17 655 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 FARSAQ9Y285 508 aaKnown RBP17.81■□□□□ 0.44
SSU72-203ENST00000378725 FRYQ5TBA9 3013 aa17.81■□□□□ 0.44
SSU72-203ENST00000378725 URADA6NGE7 173 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 TM9SF1O15321 606 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 NSA2O95478 260 aaKnown RBP17.8■□□□□ 0.44
SSU72-203ENST00000378725 ALBP02768 609 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 PIK3CBP42338 1070 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 OR1D4P47884 311 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 STXBP1P61764 594 aaKnown RBP17.8■□□□□ 0.44
SSU72-203ENST00000378725 MPP2Q14168 576 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 RBBP7Q16576 425 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 CPSF6Q16630 551 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSU72-203ENST00000378725 ST3GAL2Q16842 350 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 AGBL2Q5U5Z8 902 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 BROXQ5VW32 411 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 MRPL14Q6P1L8 145 aaKnown RBP17.8■□□□□ 0.44
SSU72-203ENST00000378725 COX15Q7KZN9 410 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 OVCH1Q7RTY7 1134 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 MYLK4Q86YV6 388 aaPredicted RBP17.8■□□□□ 0.44
SSU72-203ENST00000378725 CCNYL1Q8N7R7 359 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 WDR20Q8TBZ3 569 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 UTP15Q8TED0 518 aaKnown RBP17.8■□□□□ 0.44
SSU72-203ENST00000378725 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.8■□□□□ 0.44
SSU72-203ENST00000378725 FKBP10Q96AY3 582 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 REPS1Q96D71 796 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 SLC45A3Q96JT2 553 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 PSD3Q9NYI0 1048 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 IFT80Q9P2H3 777 aaPredicted RBP17.8■□□□□ 0.44
SSU72-203ENST00000378725 IL17BQ9UHF5 180 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 STK38LQ9Y2H1 464 aa17.8■□□□□ 0.44
SSU72-203ENST00000378725 FREM2Q5SZK8 3169 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 A0A0A6YYC8 382 aaPredicted RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 H0YIG0 161 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 I3L1I5 382 aaPredicted RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 ZWINTO95229 277 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 RECKO95980 971 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 CD63P08962 238 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 ALOX12P18054 663 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 WT1P19544 449 aaPredicted RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 PTPN4P29074 926 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 SLC18A1P54219 525 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 UCNP55089 124 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 MAGOHP61326 146 aaKnown RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 RPS15P62841 145 aaKnown RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 ASPHQ12797 758 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 LCP2Q13094 533 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 DSG2Q14126 1118 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 HERC3Q15034 1050 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms