RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 EPORP19235 508 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 NDUFV2P19404 249 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 PRLHRP49683 370 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 PTPN5P54829 565 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 AQP6Q13520 282 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 SELPLGQ14242 412 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 PTGR1Q14914 329 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 RFTN2Q52LD8 501 aaPredicted RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 BPHLQ86WA6 291 aaPredicted RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 HID1Q8IV36 788 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 MAGED4Q96JG8 741 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 ZNF490Q9ULM2 529 aaPredicted RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 SH2B3Q9UQQ2 575 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 CXorf51AA0A1B0GTR3 108 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 E7EQ34 232 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 ANHXE9PGG2 379 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 CYP2A7P20853 494 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 CXCR2P25025 360 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 SEPHS1P49903 392 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 ADPRHP54922 357 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 CHRNB3Q05901 458 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 FOXM1Q08050 763 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 PAGE2BQ5JRK9 111 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 SULT1C3Q6IMI6 304 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 ABRAXAS1Q6UWZ7 409 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 FAM3CQ92520 227 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 SDCCAG3Q96C92 435 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 MRGPRX1Q96LB2 322 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 PKP4Q99569 1192 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 DOK1Q99704 481 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 WDR26Q9H7D7 661 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 TRIM39Q9HCM9 518 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 ANKMY1Q9P2S6 941 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 PCDHGA11Q9Y5H2 935 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 MAGED1Q9Y5V3 778 aaPredicted RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 OR52A4PA6NMU1 304 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 CLDN25C9JDP6 229 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 H0Y858 1186 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 NUAK1O60285 661 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 SEC22BO75396 215 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 LRATO95237 230 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 RASAL1O95294 804 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 PAPLNO95428 1278 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 C5AR1P21730 350 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 EIF2DP41214 584 aaKnown RBP10.26□□□□□ -0.77
TPM3-212ENST00000368533 EEFSECP57772 596 aaKnown RBP10.26□□□□□ -0.77
TPM3-212ENST00000368533 ATP6AP1Q15904 470 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 PRR23CQ6ZRP0 262 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 C11orf74Q86VG3 221 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 PACRGLQ8N7B6 248 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 EFHD2Q96C19 240 aaPredicted RBP10.26□□□□□ -0.77
TPM3-212ENST00000368533 ZNF486Q96H40 463 aaPredicted RBP10.26□□□□□ -0.77
TPM3-212ENST00000368533 ZNF382Q96SR6 550 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 SLC12A9Q9BXP2 914 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 HDAC8Q9BY41 377 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 LHPPQ9H008 270 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 RAD21L1Q9H4I0 556 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 LTB4R2Q9NPC1 389 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 ZIM2Q9NZV7 527 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 UGT2A1Q9Y4X1 527 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 CKAP5Q14008 2032 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 SAP18O00422 153 aaKnown RBP10.26□□□□□ -0.77
TPM3-212ENST00000368533 B3GALT4O96024 378 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 OTCP00480 354 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 EFNA1P20827 205 aaPredicted RBP10.26□□□□□ -0.77
TPM3-212ENST00000368533 CD9P21926 228 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 CAPGP40121 348 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 PHC1P78364 1004 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 CHIT1Q13231 466 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 PCBP2Q15366 365 aaKnown RBP eCLIP10.26□□□□□ -0.772e-8■■■□□ 17.3
TPM3-212ENST00000368533 FAM174BQ3ZCQ3 159 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 TMEM52BQ4KMG9 183 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 XKR7Q5GH72 579 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 OR10A6Q8NH74 314 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 SUN5Q8TC36 379 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 NECTIN4Q96NY8 510 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 HHIPQ96QV1 700 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 SH3GL1Q99961 368 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 EBPLQ9BY08 206 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 SLC17A9Q9BYT1 436 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 HOXD1Q9GZZ0 328 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 XKR8Q9H6D3 395 aa10.26□□□□□ -0.77
TPM3-212ENST00000368533 TNPO3Q9Y5L0 923 aaKnown RBP10.26□□□□□ -0.77
TPM3-212ENST00000368533 ZNF701M0R085 212 aaPredicted RBP10.25□□□□□ -0.77
TPM3-212ENST00000368533 DFNA5O60443 496 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 LILRB5O75023 590 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 GBAP04062 536 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 TGM1P22735 817 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 MYF6P23409 242 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 CLCNKAP51800 687 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 IST1P53990 364 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 FAM98BQ52LJ0 330 aaKnown RBP10.25□□□□□ -0.77
TPM3-212ENST00000368533 XKR6Q5GH73 641 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 COQ5Q5HYK3 327 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 PLEKHS1Q5SXH7 462 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 CATSPEREQ5SY80 951 aa10.25□□□□□ -0.77
TPM3-212ENST00000368533 TPRG1LQ5T0D9 272 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms