RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 AP1G1O43747 822 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 VEGFDO43915 354 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 JUPP14923 745 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 OXTRP30559 389 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CDKN2CP42773 168 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PCYT1AP49585 367 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PNLIPRP1P54315 467 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 OR4D2P58180 307 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TRIM25Q14258 630 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 HKDC1Q2TB90 917 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 USP39Q53GS9 565 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 C8orf82Q6P1X6 216 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CORO6Q6QEF8 472 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 ENPP7Q6UWV6 458 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 IZUMO2Q6UXV1 221 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 DBX2Q6ZNG2 339 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 Q6ZNX1 250 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SLCO4C1Q6ZQN7 724 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 DHDDSQ86SQ9 333 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PDZD3Q86UT5 571 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 KBTBD6Q86V97 674 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 KRTAP1-3Q8IUG1 177 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TMEM151BQ8IW70 566 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TCAIMQ8N3R3 496 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 C1orf52Q8N6N3 182 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 ANKRD53Q8N9V6 530 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 L3MBTL4Q8NA19 623 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 LINC01555Q8NAE3 123 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PCYOX1LQ8NBM8 494 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 OR7G3Q8NG95 312 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 WDR20Q8TBZ3 569 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PNPT1Q8TCS8 783 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 OR1E3Q8WZA6 343 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 HLA-CQ95604 372 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TMEM125Q96AQ2 219 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SH3KBP1Q96B97 665 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 NECTIN4Q96NY8 510 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PRAP1Q96NZ9 151 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PKP2Q99959 881 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GPATCH1Q9BRR8 931 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TBCDQ9BTW9 1192 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 APOOQ9BUR5 198 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PRO3102Q9H379 93 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 C6orf106Q9H6K1 298 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PHPT1Q9NRX4 125 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 STOML1Q9UBI4 398 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CD300AQ9UGN4 299 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CYP8B1Q9UNU6 501 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 AURKCQ9UQB9 309 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 EIF3LQ9Y262 564 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SPAG17Q6Q759 2223 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CCDC88CQ9P219 2028 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 COL4A2P08572 1712 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TRIM64A6NGJ6 449 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TRIM64BA6NI03 449 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 RTCAO00442 366 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TERTO14746 1132 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PPM1DO15297 605 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 YY2O15391 372 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 EEDO75530 441 aaKnown RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TIPRLO75663 272 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 BCAS2O75934 225 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PAHP00439 452 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SERPIND1P05546 499 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PGRP06401 933 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CELA2BP08218 269 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SLC35G4P0C7Q5 338 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CHRNB1P11230 501 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 IL9P15248 144 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 AMD1P17707 334 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TRIM23P36406 574 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GSK3BP49841 420 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PRSS12P56730 875 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 MC1RQ01726 317 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 LIPEQ05469 1076 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CCINQ13939 588 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GRAMD1BQ3KR37 738 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SFT2D3Q587I9 215 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CACHD1Q5VU97 1274 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 OR4F3Q6IEY1 312 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 CAPN13Q6MZZ7 669 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 NOXRED1Q6NXP6 359 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 DLEU7Q6UYE1 221 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 ADCK2Q7Z695 626 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 AMIGO2Q86SJ2 522 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GALNT10Q86SR1 603 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GALNT13Q8IUC8 556 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 LRRC56Q8IYG6 542 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SIX5Q8N196 739 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 WDR48Q8TAF3 677 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PATE1Q8WXA2 126 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SNX19Q92543 992 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GATA6Q92908 595 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SLCO4A1Q96BD0 722 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PSMG3-AS1Q96PY0 264 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 OR52E6Q96RD3 313 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SLC29A3Q9BZD2 475 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 FOXQ1Q9C009 403 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms