RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 IDH3AP50213 366 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
RAP1A-201ENST00000356415 SLC9B1Q4ZJI4 515 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 ATP6AP1LQ52LC2 224 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 TCTE1Q5JU00 501 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 WASHC2DQ5SRD0 308 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 MANEAQ5SRI9 462 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 KHDRBS2Q5VWX1 349 aaKnown RBP12.59□□□□□ -0.39
RAP1A-201ENST00000356415 CSNK1A1LQ8N752 337 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 TM4SF19Q96DZ7 209 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 MS4A8Q9BY19 250 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 ACPTQ9BZG2 426 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 STRADBQ9C0K7 418 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 REXO4Q9GZR2 422 aaKnown RBP12.59□□□□□ -0.39
RAP1A-201ENST00000356415 KCNK13Q9HB14 408 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 FGF21Q9NSA1 209 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 AHSPQ9NZD4 102 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 SERTAD3Q9UJW9 196 aa12.59□□□□□ -0.39
RAP1A-201ENST00000356415 ANKRD12Q6UB98 2062 aa12.58□□□□□ -0.39
RAP1A-201ENST00000356415 LAMA1P25391 3075 aa12.58□□□□□ -0.39
RAP1A-201ENST00000356415 LRIT2A6NDA9 550 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 SAP18O00422 153 aaKnown RBP12.58□□□□□ -0.4
RAP1A-201ENST00000356415 SDHDO14521 159 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 ZSCAN9O15535 394 aaPredicted RBP12.58□□□□□ -0.4
RAP1A-201ENST00000356415 HCRTR1O43613 425 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 SNX3O60493 162 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 SEC22BO75396 215 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 RSL1D1O76021 490 aaKnown RBP12.58□□□□□ -0.4
RAP1A-201ENST00000356415 SDHBP21912 280 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 CCKBRP32239 447 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 GABRA4P48169 554 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 RAP1GDS1P52306 607 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 FOXM1Q08050 763 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 CUL3Q13618 768 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 GPR19Q15760 415 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 AP5B1Q2VPB7 878 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 GALNTL6Q49A17 601 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 XKR7Q5GH72 579 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 DEPDC1Q5TB30 811 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 GPR135Q8IZ08 494 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 SRFBP1Q8NEF9 429 aaKnown RBP12.58□□□□□ -0.4
RAP1A-201ENST00000356415 OR2T11Q8NH01 316 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 CEP70Q8NHQ1 597 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 NT5CQ8TCD5 201 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 BCAS4Q8TDM0 211 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 PPP3R2Q96LZ3 170 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 F2RL3Q96RI0 385 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 CMKLR1Q99788 373 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 EBF4Q9BQW3 602 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 TMEM120AQ9BXJ8 343 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 AKTIPQ9H8T0 292 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 SYNPO2LQ9H987 977 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 LRTM1Q9HBL6 345 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 TCF7L2Q9NQB0 619 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 STARD5Q9NSY2 213 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 C1orf109Q9NX04 203 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 PPT2Q9UMR5 302 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 CLCA2Q9UQC9 943 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 CCL27Q9Y4X3 112 aa12.58□□□□□ -0.4
RAP1A-201ENST00000356415 NDUFAB1O14561 156 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 OR2B3O76000 313 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 ETHE1O95571 254 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 LBPP18428 481 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 PDX1P52945 283 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 TGM3Q08188 693 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 TUBB3Q13509 450 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 C16orf72Q14CZ0 275 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 RSPO4Q2I0M5 234 aaPredicted RBP12.57□□□□□ -0.4
RAP1A-201ENST00000356415 HKDC1Q2TB90 917 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 TMEM35AQ53FP2 167 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 TOR1AIP1Q5JTV8 583 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 HES3Q5TGS1 186 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 GKAP1Q5VSY0 366 aaPredicted RBP12.57□□□□□ -0.4
RAP1A-201ENST00000356415 CDCP2Q5VXM1 449 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 CYB5D1Q6P9G0 228 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 PIGWQ7Z7B1 504 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 KCT2Q8NC54 265 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 ACTRT2Q8TDY3 377 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 RGMAQ96B86 450 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
RAP1A-201ENST00000356415 DEPDC7Q96QD5 511 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 OR6C1Q96RD1 312 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 OR52B2Q96RD2 323 aa12.57□□□□□ -0.4
RAP1A-201ENST00000356415 EP300Q09472 2414 aaPredicted RBP12.57□□□□□ -0.4
RAP1A-201ENST00000356415 EFCAB7A8K855 629 aa12.56□□□□□ -0.4
RAP1A-201ENST00000356415 LSM1O15116 133 aaKnown RBP12.56□□□□□ -0.4
RAP1A-201ENST00000356415 P2RX6O15547 441 aa12.56□□□□□ -0.4
RAP1A-201ENST00000356415 ERI3O43414 337 aaKnown RBP12.56□□□□□ -0.4
RAP1A-201ENST00000356415 CSO75390 466 aaKnown RBP12.56□□□□□ -0.4
RAP1A-201ENST00000356415 MYO1DO94832 1006 aa12.56□□□□□ -0.4
RAP1A-201ENST00000356415 DKK1O94907 266 aa12.56□□□□□ -0.4
RAP1A-201ENST00000356415 SEMA3DO95025 777 aa12.56□□□□□ -0.4
RAP1A-201ENST00000356415 KCNK5O95279 499 aa12.56□□□□□ -0.4
RAP1A-201ENST00000356415 TBX6O95947 436 aaPredicted RBP12.56□□□□□ -0.4
RAP1A-201ENST00000356415 HNRNPH1P31943 449 aaKnown RBP12.56□□□□□ -0.4
RAP1A-201ENST00000356415 PLA2G16P53816 162 aa12.56□□□□□ -0.4
RAP1A-201ENST00000356415 ITGA1P56199 1179 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms