RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NEUROD4Q9HD90 331 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 BORCS7-ASMTA0A0B4J1R7 106 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCDH17O14917 1159 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CREBL2O60519 120 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SCGB1D2O95969 90 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 NDUFV1P49821 464 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CASP9P55211 416 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 NFE2L1Q14494 772 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PAFAH1B3Q15102 231 aaKnown RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 LIPKQ5VXJ0 399 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SETD6Q8TBK2 473 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SNX27Q96L92 541 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 OSBPL2Q9H1P3 480 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 BCL9O00512 1426 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 TSPAN1O60635 241 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 EEDO75530 441 aaKnown RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SOX14O95416 240 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 HSD17B2P37059 387 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 BEX3Q00994 111 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 NTRK2Q16620 822 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 YIPF7Q8N8F6 280 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 GPR152Q8TDT2 470 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF558Q96NG5 402 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR51I1Q9H343 314 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 ANKMY1Q9P2S6 941 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 A0A1B0GVG6 124 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 SMIM30A4D0T7 59 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 VNN2O95498 520 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 POP4O95707 220 aaKnown RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 RPL35P42766 123 aaKnown RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 LAPTM4AQ15012 233 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 TOR1AIP1Q5JTV8 583 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 KCTD9Q7L273 389 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 TXNDC5Q8NBS9 432 aaKnown RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR2AJ1Q8NGZ0 328 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 GNPDA2Q8TDQ7 276 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 NPLQ9BXD5 320 aaPredicted RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 FBRSL1Q9HCM7 1045 aaKnown RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 C1orf196B1AJZ1 125 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 HSD17B1P14061 328 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 NUP54Q7Z3B4 507 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 FOXRED2Q8IWF2 684 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 C1orf52Q8N6N3 182 aaKnown RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 CCDC54Q8NEL0 328 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 CD180Q99467 661 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 NR2E3Q9Y5X4 410 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 C10orf71Q711Q0 1435 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF208O43345 1280 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 TUBB3Q13509 450 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 SPHARQ15513 63 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 COL28A1Q2UY09 1125 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 LINGO4Q6UY18 593 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 PLD6Q8N2A8 252 aaKnown RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZSCAN1Q8NBB4 408 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 PROKR2Q8NFJ6 384 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 MYRFLQ96LU7 910 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 A0A096LPI6 279 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 RBBP9O75884 186 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 GLUD1P00367 558 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 PIGRP01833 764 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 CSNK2A2P19784 350 aaPredicted RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 CEACAM20Q6UY09 585 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 TCTEX1D2Q8WW35 142 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 MKRN2Q9H000 416 aaKnown RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 NLGN3Q9NZ94 848 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 KCNN3Q9UGI6 736 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 PAHP00439 452 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 SIRPB2Q5JXA9 342 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 ARMC1Q9NVT9 282 aa12.33□□□□□ -0.44
SYNCRIP-201ENST00000355238 SNNO75324 88 aaPredicted RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 NCS1P62166 190 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 NPRL3Q12980 569 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 ATXN7L3Q14CW9 347 aaPredicted RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 PPP1R3AQ16821 1122 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 GPRC6AQ5T6X5 926 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CYS1Q717R9 158 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 PIM3Q86V86 326 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR10Q1Q8NGQ4 319 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR5AK3PQ8NH89 298 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 MYNNQ9NPC7 610 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 A0A1B0GVI7 797 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 SH3D21A4FU49 640 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 YJEFN3A6XGL0 299 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF878C9JN71 531 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CDC7O00311 574 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 TOXO94900 526 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 BMP8BP34820 402 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CDKN2CP42773 168 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 AADACL4Q5VUY2 407 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 BMP8AQ7Z5Y6 402 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 LILRB4Q8NHJ6 448 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms