RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 C7orf43Q8WVR3 580 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 BMFQ96LC9 184 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 NIPAL2Q9H841 368 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 TMEM165Q9HC07 324 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 FAM105AQ9NUU6 356 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 MED17Q9NVC6 651 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 NOP16Q9Y3C1 178 aaKnown RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 OR6C6A6NF89 314 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 TLR4O00206 839 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 ANXA4P09525 319 aaPredicted RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 IL7RP16871 459 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 PRPF38BQ5VTL8 546 aaKnown RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 UGT2A3Q6UWM9 527 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 ARSKQ6UWY0 536 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 IRF2BP2Q7Z5L9 587 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 TMEM200AQ86VY9 491 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 AHCYL2Q96HN2 611 aaKnown RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 HIST1H2AAQ96QV6 131 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 SDHAF3Q9NRP4 125 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 TCAF1Q9Y4C2 921 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 PGAM2P15259 253 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 TNNI3P19429 210 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 RAB3BP20337 219 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 CCINQ13939 588 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 SPPL2CQ8IUH8 684 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 B3GNT7Q8NFL0 401 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 COQ10AQ96MF6 247 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 ABCG5Q9H222 651 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 AGO3Q9H9G7 860 aaKnown RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 AGO4Q9HCK5 861 aaKnown RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 RNF24Q9Y225 148 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 HTRA2O43464 458 aaPredicted RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 LPCAT4Q643R3 524 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 OGFOD2Q6N063 350 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 ZNF565Q8N9K5 539 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 DUSP26Q9BV47 211 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 ELL3Q9HB65 397 aaPredicted RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 FAM86B1E9PN63 330 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 SLITRK3O94933 977 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 FAM86B2P0C5J1 330 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 HSPA7P48741 367 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 UBE2NLQ5JXB2 153 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 TMEM69Q5SWH9 247 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 FAM86B1Q8N7N1 296 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 OR6T1Q8NGN1 323 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 CD300LFQ8TDQ1 290 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 CFAP97Q9P2B7 532 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 USP21Q9UK80 565 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 GABBR2O75899 941 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 APOC3P02656 99 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 EFNA1P20827 205 aaPredicted RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 GBE1Q04446 702 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 SCARB2Q14108 478 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 MGAT5BQ3V5L5 792 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 GSG1LQ6UXU4 331 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.8□□□□□ -1.16
HTT-201ENST00000355072 PCDHGA8Q9Y5G5 932 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 SCN1AP35498 2009 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 C4AP0C0L4 1744 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 C4BP0C0L5 1744 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 RICTORQ6R327 1708 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 FARS2O95363 451 aaKnown RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 ATXN1P54253 815 aaKnown RBP7.8□□□□□ -1.16
HTT-201ENST00000355072 MBLAC2Q68D91 279 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 TMEM143Q96AN5 459 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 SLC19A3Q9BZV2 496 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 ARL6Q9H0F7 186 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 SLC35C2Q9NQQ7 365 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 GJB4Q9NTQ9 266 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 FAM53CQ9NYF3 392 aa7.8□□□□□ -1.16
HTT-201ENST00000355072 ACOT7O00154 380 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 FAAHO00519 579 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CYB5BO43169 146 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ZSCAN1Q8NBB4 408 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ATP6V1C2Q8NEY4 427 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SUN3Q8TAQ9 357 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MUL1Q969V5 352 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SLAMF9Q96A28 289 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LRFN5Q96NI6 719 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 JRKO75564 520 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 TFP02787 698 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ST3GAL4Q11206 333 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CARD16Q5EG05 197 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 KCTD18Q6PI47 426 aaPredicted RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 UQCC3Q6UW78 93 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 TCEANCQ8N8B7 351 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 OR4F6Q8NGB9 312 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 PTCHD1Q96NR3 888 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 DPEP2Q9H4A9 486 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 TTLL13PA6NNM8 815 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 INMT-MINDY4F8WBC2 141 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 H3BM21 787 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 H3BSA7 217 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 RBBP9O75884 186 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 C2P06681 752 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 HERV-K104P61576 105 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 GLT8D1Q68CQ7 371 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MSANTD2Q6P1R3 559 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SCIMPQ6UWF3 145 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SYNPOQ8N3V7 929 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms