RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CLK1P49759 484 aaKnown RBP18.82■□□□□ 0.6
COL13A1-201ENST00000354547 DEFB115Q30KQ5 88 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 PRSS36Q5K4E3 855 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 GRHL2Q6ISB3 625 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 SLC5A8Q8N695 610 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 APH1BQ8WW43 257 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 ALPK1Q96QP1 1244 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 TCF25Q9BQ70 676 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 COPS4Q9BT78 406 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 PCDHGA6Q9Y5G7 932 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 OBSL1O75147 1896 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 ATG13O75143 517 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 HLA-EP13747 358 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 POLR2EP19388 210 aaKnown RBP18.82■□□□□ 0.6
COL13A1-201ENST00000354547 HNF4AP41235 474 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 PRIM2P49643 509 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 METAP1P53582 386 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 SPIBQ01892 262 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 BRAT1Q6PJG6 821 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 FAM124AQ86V42 546 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 C11orf65Q8NCR3 313 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF296Q8WUU4 475 aaPredicted RBP18.82■□□□□ 0.6
COL13A1-201ENST00000354547 IRF7Q92985 503 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 PCDHGB1Q9Y5G3 927 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 KCNE2Q9Y6J6 123 aa18.82■□□□□ 0.6
COL13A1-201ENST00000354547 KPNA3O00505 521 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 PRMT3O60678 531 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 ELFN1P0C7U0 828 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 SOAT1P35610 550 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 CBX3Q13185 183 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 SYT6Q5T7P8 510 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 SVOPQ8N4V2 548 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 NFKBIDQ8NI38 313 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 BTN2A2Q8WVV5 523 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 ZHX1-C8orf76Q96EF9 292 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF300Q96RE9 604 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 DOHHQ9BU89 302 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 ACAT2Q9BWD1 397 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 ZBTB20Q9HC78 741 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 PALMDQ9NP74 551 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 RAD18Q9NS91 495 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 TMEM39AQ9NV64 488 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 RHCGQ9UBD6 479 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 ERVW-1Q9UQF0 538 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 C1orf226A1L170 272 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 GANABQ14697 944 aaKnown RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 IQCCQ4KMZ1 466 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 HENMT1Q5T8I9 393 aaKnown RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 TRAPPC5Q8IUR0 188 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 MMP21Q8N119 569 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 WDR48Q8TAF3 677 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 GLYATL1Q969I3 302 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF689Q96CS4 500 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 FCRL1Q96LA6 429 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 FOPNLQ96NB1 174 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 SORBS1Q9BX66 1292 aaKnown RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 AKIP1Q9NQ31 210 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 GPATCH2Q9NW75 528 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 EXO1Q9UQ84 846 aaKnown RBP18.81■□□□□ 0.6
COL13A1-201ENST00000354547 PCDHGB3Q9Y5G1 929 aa18.81■□□□□ 0.6
COL13A1-201ENST00000354547 EFCAB9A8MZ26 197 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 H0YIV9 168 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 H3BM21 787 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 PLK4O00444 970 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 ZSCAN9O15535 394 aaPredicted RBP18.8■□□□□ 0.6
COL13A1-201ENST00000354547 LIPAP38571 399 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 VEZF1Q14119 521 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 SLBPQ14493 270 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL13A1-201ENST00000354547 PROX2Q3B8N5 592 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 SLC39A5Q6ZMH5 540 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 TSEN54Q7Z6J9 526 aaKnown RBP18.8■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF740Q8NDX6 193 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 ATL1Q8WXF7 558 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 NEURL2Q9BR09 285 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 SLC35A5Q9BS91 424 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 NDUFAF4Q9P032 175 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 KPNA4O00629 521 aaPredicted RBP18.8■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF30P17039 623 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 TIA1P31483 386 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL13A1-201ENST00000354547 RXRGP48443 463 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 CD97P48960 835 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 TBPL1P62380 186 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 NTHL1P78549 312 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 NIPAL1Q6NVV3 410 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 MED27Q6P2C8 311 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 FAHD1Q6P587 224 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 TRIM73Q86UV7 250 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 SLC44A2Q8IWA5 706 aaPredicted RBP18.8■□□□□ 0.6
COL13A1-201ENST00000354547 OR9Q2Q8NGE9 314 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF480Q8WV37 535 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 GTPBP3Q969Y2 492 aaKnown RBP18.8■□□□□ 0.6
COL13A1-201ENST00000354547 NRTNQ99748 197 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 NIPSNAP1Q9BPW8 284 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 ROGDIQ9GZN7 287 aa18.8■□□□□ 0.6
COL13A1-201ENST00000354547 LOC100506127A0A0U1RQW1 187 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 KRBA1A5PL33 1030 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SOBPA7XYQ1 873 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 TMEM229AB2RXF0 380 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 DNAJB5O75953 348 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 HSMCR30P0CW71 290 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms