RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 NLGN4XQ8N0W4 816 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 SYNPOQ8N3V7 929 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 SLC5A8Q8N695 610 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 OR9Q2Q8NGE9 314 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 NFKBIDQ8NI38 313 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 APH1BQ8WW43 257 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 C7orf34Q96L11 122 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 RAD18Q9NS91 495 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 PLAGL1Q9UM63 463 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 SLC6A14Q9UN76 642 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 LOC100506127A0A0U1RQW1 187 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 K7ESM1 405 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 GCM2O75603 506 aaPredicted RBP18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 HSMCR30P0CW71 290 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 BMP4P12644 408 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 TIMP2P16035 220 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 MAGP20916 626 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 PRIM2P49643 509 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 TBPL1P62380 186 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 ZNF846Q147U1 533 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 ERICH5Q6P6B1 374 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 WDR48Q8TAF3 677 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 GTPBP3Q969Y2 492 aaKnown RBP18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 HHIPQ96QV1 700 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 COPS4Q9BT78 406 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 RNF167Q9H6Y7 350 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 RNF6Q9Y252 685 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 PCDHGA6Q9Y5G7 932 aa18.4■□□□□ 0.54
LYSMD4-202ENST00000344791 ATG13O75143 517 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 SLCO2B1O94956 709 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 CYP2A6P11509 494 aaPredicted RBP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 POLR2EP19388 210 aaKnown RBP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 SLBPQ14493 270 aaKnown RBP eCLIP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 CNKSR3Q6P9H4 555 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 TRMT11Q7Z4G4 463 aaKnown RBP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 TSPYL5Q86VY4 417 aaPredicted RBP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 ZNF480Q8WV37 535 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 IRF7Q92985 503 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 LGALS12Q96DT0 336 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 NIPSNAP1Q9BPW8 284 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 SLC35A5Q9BS91 424 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 SPNS1Q9H2V7 528 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 GPATCH2Q9NW75 528 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 SNX8Q9Y5X2 465 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 KCNE2Q9Y6J6 123 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 H3BM21 787 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 EIF3FO00303 357 aaPredicted RBP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 KPNA5O15131 536 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 PSIP1O75475 530 aaKnown RBP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 LAG3P18627 525 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 LIPAP38571 399 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 RXRGP48443 463 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 CARTPTQ16568 116 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 DGUOKQ16854 277 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 GRHL2Q6ISB3 625 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 FAM124AQ86V42 546 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 CACUL1Q86Y37 369 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 PSMA8Q8TAA3 256 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 FBLIM1Q8WUP2 373 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 ZNF566Q969W8 418 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 IL17FQ96PD4 163 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 ALPK1Q96QP1 1244 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 GABARAPL1Q9H0R8 117 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 GPR83Q9NYM4 423 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 TAS2R16Q9NYV7 291 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 KLHL42Q9P2K6 505 aa18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 EXO1Q9UQ84 846 aaKnown RBP18.39■□□□□ 0.53
LYSMD4-202ENST00000344791 M0QX08 132 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 SEMG1P04279 462 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 ITGB8P26012 769 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 HENMT1Q5T8I9 393 aaKnown RBP18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 BRAT1Q6PJG6 821 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 SLC39A5Q6ZMH5 540 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 TSEN54Q7Z6J9 526 aaKnown RBP18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 C11orf65Q8NCR3 313 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 BTN2A2Q8WVV5 523 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 GLYATL1Q969I3 302 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 ZNF689Q96CS4 500 aaPredicted RBP18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 ZHX1-C8orf76Q96EF9 292 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 ERVW-1Q9UQF0 538 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 OBSL1O75147 1896 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 CCDC88CQ9P219 2028 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 C1orf226A1L170 272 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 HIDE1A8MVS5 230 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 FAM227AF5H4B4 570 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 SLC22A1O15245 554 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 SLC16A5O15375 505 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 RPS26P62854 115 aaKnown RBP18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 CBX3Q13185 183 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 COMMD6Q7Z4G1 85 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 RNF130Q86XS8 419 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 CCDC103Q8IW40 242 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 YIPF6Q96EC8 236 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 FOPNLQ96NB1 174 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 ZNF300Q96RE9 604 aaPredicted RBP18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 DOHHQ9BU89 302 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 C6orf62Q9GZU0 229 aaPredicted RBP18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 MIR1-1HGQ9H1L0 117 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 OR2AG1Q9H205 316 aa18.38■□□□□ 0.53
LYSMD4-202ENST00000344791 NDUFAF4Q9P032 175 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms