RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 UBA2Q9UBT2 640 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FAM8A1Q9UBU6 413 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 SNX7Q9UNH6 387 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PCDHGB3Q9Y5G1 929 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PCDHGB2Q9Y5G2 931 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 B4DXG7 233 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ANKRD66B4E2M5 251 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 NT5C1B-RDH14C9J2C7 533 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 YY2O15391 372 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 TNFRSF21O75509 655 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 STK16O75716 305 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 AP2A2O94973 939 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CLDN9O95484 217 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 F2P00734 622 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CYP17A1P05093 508 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 TSPAN19P0C672 248 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PSKH1P11801 424 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 HOXD9P28356 352 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PTGER3P43115 390 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 KCNJ10P78508 379 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ALDH6A1Q02252 535 aaKnown RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 KLHL17Q6TDP4 642 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 TRIM46Q7Z4K8 759 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 MON1AQ86VX9 555 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FAM20CQ8IXL6 584 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FAM109AQ8N4B1 249 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 GPRC5AQ8NFJ5 357 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PCNPQ8WW12 178 aaKnown RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 KATNAL1Q9BW62 490 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 GABARAPL3Q9BY60 117 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 SRRQ9GZT4 340 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 MKRN2Q9H000 416 aaKnown RBP9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ARL15Q9NXU5 204 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FZD4Q9ULV1 537 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 AP3M1Q9Y2T2 418 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CDRT1O95170 752 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ITPKAP23677 461 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 ETV6P41212 452 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 RGS4P49798 205 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 CYP4F8P98187 520 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FAPQ12884 760 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 TIMM50Q3ZCQ8 353 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 DGKKQ5KSL6 1271 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PAQR6Q6TCH4 344 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PTCHD4Q6ZW05 846 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 SERPINA11Q86U17 422 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 SERPINA9Q86WD7 417 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 AMIGO1Q86WK6 493 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 BBS7Q8IWZ6 715 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 GPR65Q8IYL9 337 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 BHMTQ93088 406 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 PKMYT1Q99640 499 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 GDF15Q99988 308 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 NARFLQ9H6Q4 476 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 TPT1P8Q9HAU6 139 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 DNAJC27Q9NZQ0 273 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 MAN2B2Q9Y2E5 1009 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 KLK4Q9Y5K2 254 aa9.31□□□□□ -0.92
PTPRA-202ENST00000318266 FABP12A6NFH5 140 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PLK4O00444 970 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PCDH17O14917 1159 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 ARHGEF9O43307 516 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 SOX14O95416 240 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PRAMEF1O95521 474 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 LAMP1P11279 417 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 KIR2DL3P43628 341 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 CAV3P56539 151 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PCBP1Q15365 356 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTPRA-202ENST00000318266 DUSP7Q16829 419 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 TATDN3Q17R31 274 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 DUOXA1Q1HG43 343 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 LEXMQ3ZCV2 418 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 LIPKQ5VXJ0 399 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 MFSD14CQ5VZR4 134 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 BPHLQ86WA6 291 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-202ENST00000318266 ADGRG2Q8IZP9 1017 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 OR9Q1Q8NGQ5 310 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 FBXO32Q969P5 355 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 EID2BQ96D98 161 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 MTERF1Q99551 399 aaKnown RBP9.3□□□□□ -0.92
PTPRA-202ENST00000318266 MGME1Q9BQP7 344 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 HDHD5Q9BXW7 423 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 CCSER2Q9H7U1 834 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 RNF121Q9H920 327 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 NDUFAF4Q9P032 175 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 TMPRSS11EQ9UL52 423 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PCDHGA2Q9Y5H1 932 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PDE4DIPQ5VU43 2346 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 A0A1W2PQL4 384 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PLD2O14939 933 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PCDH7O60245 1069 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 NOS1APO75052 506 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-202ENST00000318266 SEMG1P04279 462 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 CSF3P09919 207 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 EBLN1P0CF75 366 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 HLA-EP13747 358 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 CRATP43155 626 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 PSEN2P49810 448 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 RORCP51449 518 aa9.3□□□□□ -0.92
PTPRA-202ENST00000318266 HNRNPA0Q13151 305 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms