RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 RNF6Q9Y252 685 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PCDHB5Q9Y5E4 795 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 UBXN8O00124 270 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SLC28A1O00337 649 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MMP20O60882 483 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 EEDO75530 441 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MPC2O95563 127 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 POMCP01189 267 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SNRPB2P08579 225 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ADRB1P08588 477 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CXCL8P10145 99 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PAMP19021 973 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 GPX3P22352 226 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 AZGP1P25311 298 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 NRIP1P48552 1158 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 GEMP55040 296 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SOX10P56693 466 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CXCR4P61073 352 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 KCNJ10P78508 379 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 FASTKQ14296 549 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 KCNAB1Q14722 419 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SEC23BQ15437 767 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SYT16Q17RD7 645 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 AGKQ53H12 422 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 XKR7Q5GH72 579 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PDZK1Q5T2W1 519 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MSANTD2Q6P1R3 559 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 KLHL17Q6TDP4 642 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ZER1Q7Z7L7 766 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 KCNMB4Q86W47 210 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PAQR7Q86WK9 346 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 GHDCQ8N2G8 530 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MS4A15Q8N5U1 240 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 RNF149Q8NC42 400 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 WDR36Q8NI36 951 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 CNIH3Q8TBE1 160 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ELP5Q8TE02 316 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PFDN5Q99471 154 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ZPBPQ9BS86 351 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SPATC1LQ9H0A9 340 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MFSD1Q9H3U5 465 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 GAREM1Q9H706 876 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SPON1Q9HCB6 807 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 DYRK4Q9NR20 520 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SDR39U1Q9NRG7 319 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 ZIM2Q9NZV7 527 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 MYEF2Q9P2K5 600 aaKnown RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 SAE1Q9UBE0 346 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-201ENST00000316433 BCS1LQ9Y276 419 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 PCDHA9Q9Y5H5 950 aa6.43□□□□□ -1.38
ZNF540-201ENST00000316433 HHLA1C9JL84 531 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 LGALS8O00214 317 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 PSMD9O00233 223 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CBX4O00257 560 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 TO15178 435 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CDC123O75794 336 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ERVK-10P10266 1014 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 JUNDP17535 347 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CTPS1P17812 591 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RAB3BP20337 219 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 FPR3P25089 353 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 MGAT1P26572 445 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RYKP34925 604 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 HNMTP50135 292 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CLCN7P51798 805 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 LIMK1P53667 647 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CDH13P55290 713 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 SOX4Q06945 474 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 STX4Q12846 297 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 KCNAB2Q13303 367 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 FSCN1Q16658 493 aaKnown RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 PFKFB4Q16877 469 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 PYCR3Q53H96 274 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 SPOUT1Q5T280 376 aaKnown RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF691Q5VV52 312 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CYB5R2Q6BCY4 276 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 OR6B2Q6IFH4 312 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 PLBD1Q6P4A8 553 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RIMKLAQ8IXN7 391 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 SLC43A2Q8N370 569 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 C12orf45Q8N5I9 185 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 AVL9Q8NBF6 648 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CHTF18Q8WVB6 975 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 PDLIM5Q96HC4 596 aaKnown RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 PPP3R2Q96LZ3 170 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 Q96MT0 163 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 HHIPQ96QV1 700 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 VRK1Q99986 396 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 SRRQ9GZT4 340 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ANKRD19PQ9H560 264 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 MVB12BQ9H7P6 319 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 GLOD4Q9HC38 313 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CCDC167Q9P0B6 97 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 V9GYH0 126 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 TEX13CA0A0J9YWL9 993 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RGS10O43665 173 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ATG12O94817 140 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RASGRP1O95267 797 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms