RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 UGT2B17O75795 530 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 YES1P07947 543 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 HMGA1P17096 107 aaKnown RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 CA5AP35218 305 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SOX6P35712 828 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 CDKN2CP42773 168 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 NSG1P42857 185 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 GDF5P43026 501 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PRIM2P49643 509 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 UGT2B15P54855 530 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 LRRC74AQ0VAA2 488 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 TWF1Q12792 350 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 TBRG1Q3YBR2 411 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 FBXO43Q4G163 708 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 YIF1BQ5BJH7 314 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 CEP78Q5JTW2 689 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PRSS36Q5K4E3 855 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 KIAA1841Q6NSI8 718 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 FAM151BQ6UXP7 276 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SPERTQ8NA61 448 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 HJURPQ8NCD3 748 aaPredicted RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 TTC9Q92623 222 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 DMRTB1Q96MA1 342 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 BARD1Q99728 777 aaKnown RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 BACE2Q9Y5Z0 518 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 LAMA1P25391 3075 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 H3BQ06 376 aaPredicted RBP10.01□□□□□ -0.81
SKA1-201ENST00000285116 GPR39O43194 453 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 MYCLP1P12525 358 aaPredicted RBP10.01□□□□□ -0.81
SKA1-201ENST00000285116 BPIP17213 487 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 ITGA2P17301 1181 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 ITGB6P18564 788 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 PIK3CBP42338 1070 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 KIR3DL1P43629 444 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 WNT3P56703 355 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 GTF2H3Q13889 308 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 KCNC3Q14003 757 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 RTP2Q5QGT7 225 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 ZDHHC20Q5W0Z9 365 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 DOK6Q6PKX4 331 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 TPGS1Q6ZTW0 290 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 NRARPQ7Z6K4 114 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 CCDC71Q8IV32 467 aaPredicted RBP10.01□□□□□ -0.81
SKA1-201ENST00000285116 FLCNQ8NFG4 579 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 APH1BQ8WW43 257 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 MYDGFQ969H8 173 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 ZFYVE19Q96K21 471 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 C7orf34Q96L11 122 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 SDHCQ99643 169 aaPredicted RBP10.01□□□□□ -0.81
SKA1-201ENST00000285116 RPRD1BQ9NQG5 326 aaKnown RBP10.01□□□□□ -0.81
SKA1-201ENST00000285116 KRT84Q9NSB2 600 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 ZDHHC3Q9NYG2 299 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 BTNL2Q9UIR0 455 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 TBC1D24Q9ULP9 559 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 PCDHGB2Q9Y5G2 931 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 GON4LQ3T8J9 2241 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 HSD3B1P14060 373 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 HSD3B2P26439 372 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 IFNA8P32881 189 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 TIE1P35590 1138 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 NPRL3Q12980 569 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 PTPRRQ15256 657 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 ZNF438Q7Z4V0 828 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 NOXA1Q86UR1 476 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 P3H2Q8IVL5 708 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 SIX5Q8N196 739 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 SELENOMQ8WWX9 145 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 C11orf24Q96F05 449 aaPredicted RBP10.01□□□□□ -0.81
SKA1-201ENST00000285116 RNF170Q96K19 258 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 RIPOR3Q96MK2 946 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 OR2A14Q96R47 310 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 TTYH2Q9BSA4 534 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 TTPALQ9BTX7 342 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 APOL5Q9BWW9 433 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 STMN3Q9NZ72 180 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 PSORS1C1Q9UIG5 152 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 GPSM3Q9Y4H4 160 aa10.01□□□□□ -0.81
SKA1-201ENST00000285116 LOC100506127A0A0U1RQW1 187 aa10□□□□□ -0.81
SKA1-201ENST00000285116 GFYI3L273 518 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CLIC1O00299 241 aa10□□□□□ -0.81
SKA1-201ENST00000285116 AP3D1O14617 1153 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PCDHGA12O60330 932 aa10□□□□□ -0.81
SKA1-201ENST00000285116 EPN2O95208 641 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CYP2A7P20853 494 aa10□□□□□ -0.81
SKA1-201ENST00000285116 AOAHP28039 575 aa10□□□□□ -0.81
SKA1-201ENST00000285116 HNF4AP41235 474 aa10□□□□□ -0.81
SKA1-201ENST00000285116 RPS5P46782 204 aaKnown RBP10□□□□□ -0.81
SKA1-201ENST00000285116 SLC11A1P49279 550 aa10□□□□□ -0.81
SKA1-201ENST00000285116 AP1S2P56377 157 aa10□□□□□ -0.81
SKA1-201ENST00000285116 VLDLRP98155 873 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CREMQ03060 361 aa10□□□□□ -0.81
SKA1-201ENST00000285116 SLC14A1Q13336 389 aa10□□□□□ -0.81
SKA1-201ENST00000285116 LAPTM4AQ15012 233 aa10□□□□□ -0.81
SKA1-201ENST00000285116 LIPJQ5W064 366 aa10□□□□□ -0.81
SKA1-201ENST00000285116 NOXRED1Q6NXP6 359 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ASB11Q8WXH4 323 aa10□□□□□ -0.81
SKA1-201ENST00000285116 DNASE1L2Q92874 299 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms