RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TSPYL5Q86VY4 417 aaPredicted RBP16.54■□□□□ 0.24
SRF-201ENST00000265354 C11orf84Q9BUA3 381 aaPredicted RBP16.54■□□□□ 0.24
SRF-201ENST00000265354 KCNH6Q9H252 994 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 RHBGQ9H310 441 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 RUVBL1Q9Y265 456 aaKnown RBP16.54■□□□□ 0.24
SRF-201ENST00000265354 TRAV19A0A0A6YYK7 116 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 A0A1B0GVC2 190 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 A6NIN4 97 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 RACK1P63244 317 aaKnown RBP16.54■□□□□ 0.24
SRF-201ENST00000265354 VLDLRP98155 873 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 MLLT1Q03111 559 aaPredicted RBP16.54■□□□□ 0.24
SRF-201ENST00000265354 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.24
SRF-201ENST00000265354 CARD16Q5EG05 197 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 SHFQ7M4L6 423 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 SNX20Q7Z614 316 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 PAPD5Q8NDF8 572 aaKnown RBP16.54■□□□□ 0.24
SRF-201ENST00000265354 ARRDC2Q8TBH0 407 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 PSKH2Q96QS6 385 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 GINS4Q9BRT9 223 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 WRAP53Q9BUR4 548 aaKnown RBP16.54■□□□□ 0.24
SRF-201ENST00000265354 KLHL31Q9H511 634 aa16.54■□□□□ 0.24
SRF-201ENST00000265354 TTC3P53804 2025 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 MEN1O00255 615 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 PQBP1O60828 265 aaKnown RBP16.53■□□□□ 0.24
SRF-201ENST00000265354 KLK1P06870 262 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 CLTBP09497 229 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 GP2P55259 537 aaKnown RBP16.53■□□□□ 0.24
SRF-201ENST00000265354 CDK6Q00534 326 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 BTBD16Q32M84 506 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 RNF130Q86XS8 419 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 PGBD5Q8N414 524 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 C10orf53Q8N6V4 93 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■■■■□ 21.4
SRF-201ENST00000265354 NT5C3BQ969T7 300 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 AHSPQ9NZD4 102 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 EMC3Q9P0I2 261 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 NLKQ9UBE8 527 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
SRF-201ENST00000265354 AGAP5A6NIR3 686 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 TLR4O00206 839 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 NUAK1O60285 661 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 EPOP01588 193 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 BCHEP06276 602 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 EBLN1P0CF75 366 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 ELNP15502 786 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 RAB8AP61006 207 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 MAD2L1BPQ15013 274 aaPredicted RBP16.53■□□□□ 0.24
SRF-201ENST00000265354 OXA1LQ15070 435 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 COQ5Q5HYK3 327 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 CRB2Q5IJ48 1285 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 ALDH16A1Q8IZ83 802 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 DPP10Q8N608 796 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 CCM2Q9BSQ5 444 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 SCN9AQ15858 1988 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 KDM4BO94953 1096 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 GRIK2Q13002 908 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 SEMA3BQ13214 749 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 SMUG1Q53HV7 270 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 ATG9BQ674R7 924 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 TEX47Q8TBZ9 253 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 AP3S1Q92572 193 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 MUL1Q969V5 352 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 ABCD2Q9UBJ2 740 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 GPSM3Q9Y4H4 160 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 CDK5RAP2Q96SN8 1893 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 FAM172BPA6NC97 362 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 CD72P21854 359 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 RPS3P23396 243 aaKnown RBP eCLIP16.53■□□□□ 0.24
SRF-201ENST00000265354 XKP51811 444 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 PRSS48Q7RTY5 328 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 OR7G1Q8NGA0 311 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 CSF3RQ99062 836 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 CPNE5Q9HCH3 593 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 KLHL28Q9NXS3 571 aa16.53■□□□□ 0.24
SRF-201ENST00000265354 A0A1W2PRB8 838 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 SLC10A3P09131 477 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 PPIBP23284 216 aaKnown RBP16.52■□□□□ 0.24
SRF-201ENST00000265354 LIPAP38571 399 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 GATMP50440 423 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 BNC1Q01954 994 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 ZNF691Q5VV52 312 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 LHFPL3Q86UP9 236 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 KLHDC9Q8NEP7 349 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 CFAP20Q9Y6A4 193 aaKnown RBP16.52■□□□□ 0.24
SRF-201ENST00000265354 ISM1B1AKI9 464 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 CDKN2CP42773 168 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 RPL6Q02878 288 aaKnown RBP16.52■□□□□ 0.24
SRF-201ENST00000265354 SUZ12Q15022 739 aaKnown RBP16.52■□□□□ 0.24
SRF-201ENST00000265354 ZNF181Q2M3W8 571 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 TXNDC8Q6A555 127 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 NAGSQ8N159 534 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 KLHL6Q8WZ60 621 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 SUSD3Q96L08 255 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 TTTY10Q9BZA0 68 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 RDH8Q9NYR8 311 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 MAPRE3Q9UPY8 281 aa16.52■□□□□ 0.24
SRF-201ENST00000265354 AP3D1O14617 1153 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms