RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TECRLQ5HYJ1 363 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 C6orf163Q5TEZ5 329 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 KRT39Q6A163 491 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 TMEM211Q6ICI0 200 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 NOTCH2NLQ7Z3S9 236 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 CEP57Q86XR8 500 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 APLFQ8IW19 511 aaPredicted RBP4.42□□□□□ -1.7
TRA2B-201ENST00000259043 FBXO16Q8IX29 292 aaPredicted RBP4.42□□□□□ -1.7
TRA2B-201ENST00000259043 PM20D2Q8IYS1 436 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 MAML2Q8IZL2 1156 aaPredicted RBP4.42□□□□□ -1.7
TRA2B-201ENST00000259043 EMC1Q8N766 993 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 IQUBQ8NA54 791 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 CAMKVQ8NCB2 501 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 TM9SF4Q92544 642 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 MRPL38Q96DV4 380 aaKnown RBP4.42□□□□□ -1.7
TRA2B-201ENST00000259043 ERLEC1Q96DZ1 483 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 RAD9AQ99638 391 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 SEMA3CQ99985 751 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 GPR88Q9GZN0 384 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 GOLPH3LQ9H4A5 285 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 UPF2Q9HAU5 1272 aaKnown RBP4.42□□□□□ -1.7
TRA2B-201ENST00000259043 SLC38A10Q9HBR0 1119 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 TNNQ9UQP3 1299 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 Q9Y3F1 56 aa4.42□□□□□ -1.7
TRA2B-201ENST00000259043 ZFP37Q9Y6Q3 630 aaPredicted RBP4.42□□□□□ -1.7
TRA2B-201ENST00000259043 SETXQ7Z333 2677 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 KIAA1217Q5T5P2 1943 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SMIM1B2RUZ4 78 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 LOC730098B7Z3J9 87 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 BLOC1S5-TXNDC5H3BN57 136 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SYNCRIPO60506 623 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 NDUFB10O96000 172 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 PDGFBP01127 241 aaPredicted RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SUPT20HL2P0C7V6 817 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 ERVK-10P10266 1014 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 EEF1B2P24534 225 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 HOXC8P31273 242 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SNRPEP62304 92 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SCN1BQ07699 218 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 HSPB3Q12988 150 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 NR1D2Q14995 579 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 ZNF876PQ49A33 203 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 EPC2Q52LR7 807 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 CCDC158Q5M9N0 1113 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 C12orf60Q5U649 245 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SFMBT2Q5VUG0 894 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SHQ1Q6PI26 577 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 MFSD6Q6ZSS7 791 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 CENPVQ7Z7K6 275 aaPredicted RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 TRPT1Q86TN4 253 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 RPAINQ86UA6 219 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 ADIPOR2Q86V24 386 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 CCAR2Q8N163 923 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 FBXO39Q8N4B4 442 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 GCSAMQ8N6F7 178 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 TMCO5AQ8N6Q1 288 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 EXD1Q8NHP7 514 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 GDAP1Q8TB36 358 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 ATL1Q8WXF7 558 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 MS4A10Q96PG2 267 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 GFI1Q99684 422 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 FSD1Q9BTV5 496 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 PPIL3Q9H2H8 161 aaKnown RBP4.41□□□□□ -1.7
TRA2B-201ENST00000259043 SLC24A2Q9UI40 661 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 ACAD8Q9UKU7 415 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 CEP295Q9C0D2 2601 aa4.41□□□□□ -1.7
TRA2B-201ENST00000259043 MYH7BA7E2Y1 1941 aa4.4□□□□□ -1.7
TRA2B-201ENST00000259043 TRAV34A0A0B4J273 112 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 IGKV6D-41A0A0C4DH26 115 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 ANKRD66B4E2M5 251 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 F5H6K3 240 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 CCDC188H7C350 402 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 ZBTB43O43298 467 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 PLPP2O43688 288 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 STX6O43752 255 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 PCDH7O60245 1069 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 TGDSO95455 350 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 C22orf31O95567 290 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 BAG2O95816 211 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 TSHBP01222 138 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 ACHEP22303 614 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 NMBRP28336 390 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 ALDH4A1P30038 563 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 HOXC13P31276 330 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 HSPA4P34932 840 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 NBL1P41271 181 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 BMXP51813 675 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 MLLT10P55197 1068 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 CDH13P55290 713 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 GNB1P62873 340 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 MBTD1Q05BQ5 628 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 KLRC3Q07444 240 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 GAGE2BQ13066 116 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 GAGE2EQ4V326 116 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 ZC2HC1CQ53FD0 456 aaPredicted RBP4.4□□□□□ -1.71
TRA2B-201ENST00000259043 GAGE2AQ6NT46 116 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 CAVIN1Q6NZI2 390 aaKnown RBP4.4□□□□□ -1.71
TRA2B-201ENST00000259043 TRAT1Q6PIZ9 186 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 MSANTD1Q6ZTZ1 278 aa4.4□□□□□ -1.71
TRA2B-201ENST00000259043 CCDC91Q7Z6B0 441 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms