RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 AIF1LQ9BQI0 150 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 KRCC1Q9NPI7 259 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 UTS2RQ9UKP6 389 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 HCN1O60741 890 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 HLA-DQA2P01906 255 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 FHP07954 510 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 CELP19835 753 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SSTR4P31391 388 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 HNRNPA0Q13151 305 aaKnown RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 NDUFA5Q16718 116 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 LCN1P1Q5VSP4 162 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 DPY19L3Q6ZPD9 716 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SHFQ7M4L6 423 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 TMEM151AQ8N4L1 468 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SLC22A17Q8WUG5 538 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 KLHL6Q8WZ60 621 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 GABRQQ9UN88 632 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 ABCG2Q9UNQ0 655 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SEC16AO15027 2179 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 BCORQ6W2J9 1755 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 ABHD14A-ACY1A0A1B0GW23 586 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 NOTOA8MTQ0 251 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 RFPL2O75678 378 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 B3GALT4O96024 378 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 DHFRP00374 187 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 NPPAP01160 153 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 RLN1P04808 185 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 SLC2A2P11168 524 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-201ENST00000226574 DSTNP60981 165 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 WSCD2Q2TBF2 565 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 PLEKHG7Q6ZR37 379 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 TPRG1Q6ZUI0 275 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 PGBD5Q8N414 524 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 ZCCHC10Q8TBK6 192 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 BRINP2Q9C0B6 783 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 ARHGAP39Q9C0H5 1083 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 MED28Q9H204 178 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 IL26Q9NPH9 171 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 MAPRE3Q9UPY8 281 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 A6NL46 340 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 CAPN15O75808 1086 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 MYL9P24844 172 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 ETV3P41162 512 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 PPIGQ13427 754 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■■□ 24.6
NFKB1-201ENST00000226574 DOC2AQ14183 400 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 HEPACAMQ14CZ8 416 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 BORAQ6PGQ7 559 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 MARCH9Q86YJ5 346 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 NAGSQ8N159 534 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 SPATA5L1Q9BVQ7 753 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 ELAC1Q9H777 363 aaKnown RBP13.28□□□□□ -0.28
NFKB1-201ENST00000226574 ZNF224Q9NZL3 707 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 POFUT2Q9Y2G5 429 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 TTC3P53804 2025 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 LRP5O75197 1615 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 STC2O76061 302 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 PCCBP05166 539 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 NUDT7P0C024 238 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 SDC2P34741 201 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 E2F2Q14209 437 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 LASP1Q14847 261 aaKnown RBP13.28□□□□□ -0.28
NFKB1-201ENST00000226574 SPATC1Q76KD6 591 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 NPAS4Q8IUM7 802 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 NLGN4XQ8N0W4 816 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 OR8H3Q8N146 312 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 MMP27Q9H306 513 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 ADAP2Q9NPF8 381 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 CXXC1Q9P0U4 656 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-201ENST00000226574 TAC3Q9UHF0 121 aa13.28□□□□□ -0.28
NFKB1-201ENST00000226574 SPAG17Q6Q759 2223 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 A0A1W2PPK0 400 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 TSPAN6O43657 245 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 RPN2P04844 631 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 ALPLP05186 524 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 C8AP07357 584 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 RPS17P08708 135 aaKnown RBP13.27□□□□□ -0.28
NFKB1-201ENST00000226574 BPIP17213 487 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 OTUD1Q5VV17 481 aaPredicted RBP13.27□□□□□ -0.28
NFKB1-201ENST00000226574 ATG9BQ674R7 924 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 C22orf42Q6IC83 251 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 ARL9Q6T311 187 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 PHYKPLQ8IUZ5 450 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 PLD4Q96BZ4 506 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 COQ3Q9NZJ6 369 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 TBC1D14Q9P2M4 693 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 INTS6Q9UL03 887 aaKnown RBP13.27□□□□□ -0.28
NFKB1-201ENST00000226574 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
NFKB1-201ENST00000226574 CTDSP2O14595 271 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 H1F0P07305 194 aaKnown RBP13.27□□□□□ -0.29
NFKB1-201ENST00000226574 HMGCLP35914 325 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 PPP5CP53041 499 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 RAB8AP61006 207 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 DESI1Q6ICB0 168 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 CNTN4Q8IWV2 1026 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 COLGALT2Q8IYK4 626 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 SUN5Q8TC36 379 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 GTF2H4Q92759 462 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms