RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 FAM86B1Q8N7N1 296 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 VPS37AQ8NEZ2 397 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 OR52E1Q8NGJ3 308 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 WDR92Q96MX6 357 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 PHF12Q96QT6 1004 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 SORBS1Q9BX66 1292 aaKnown RBP16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 RAB11FIP5Q9BXF6 653 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 MS4A8Q9BY19 250 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 PITHD1Q9GZP4 211 aaPredicted RBP16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 UBAP1Q9NZ09 502 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 DLGAP2Q9P1A6 1054 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 ICKQ9UPZ9 632 aa16.52■□□□□ 0.23
RABGGTA-201ENST00000216840 APBB3O95704 486 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 LDLRP01130 860 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 RETP07949 1114 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 FURINP09958 794 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 RAP2AP10114 183 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 GPX2P18283 190 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 HNRNPA2B1P22626 353 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 TAS2R50P59544 299 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 CYP4F2P78329 520 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 CSNK1G2P78368 415 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 MC1RQ01726 317 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 PRDX1Q06830 199 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 C2orf80Q0P641 193 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 PDE7AQ13946 482 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 FAM98BQ52LJ0 330 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 DEPDC1Q5TB30 811 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 KHDRBS2Q5VWX1 349 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 CBR4Q8N4T8 237 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 PACRGLQ8N7B6 248 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 OR2A1Q8NGT9 310 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 FBXO30Q8TB52 745 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 HMGB4Q8WW32 186 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 NCLNQ969V3 563 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 UGT2B28Q9BY64 529 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 BHLHE41Q9C0J9 482 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 EBF1Q9UH73 591 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 PCDHB11Q9Y5F2 797 aa16.51■□□□□ 0.23
RABGGTA-201ENST00000216840 IGKV1-8A0A0C4DH67 115 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 PDLIM1O00151 329 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 RNASET2O00584 256 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 ACOX3O15254 700 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 ZCCHC18P0CG32 403 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 SERPINB1P30740 379 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 CHRNB3Q05901 458 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 NKG7Q16617 165 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 R3HCC1LQ7Z5L2 792 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 SPRED1Q7Z699 444 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 MSANTD3Q96H12 275 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 C9orf16Q9BUW7 83 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 DCAF13Q9NV06 445 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 AHSPQ9NZD4 102 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 TBC1D29Q9UFV1 150 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 OAZ3Q9UMX2 235 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 SNRNP200O75643 2136 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 C1orf226A1L170 272 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 PLPP1O14494 284 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 SEMA3DO95025 777 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 TPP2P29144 1249 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 FLCNQ8NFG4 579 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 TSACCQ96A04 125 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 F2RL3Q96RI0 385 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 PHF7Q9BWX1 381 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 OSBPL11Q9BXB4 747 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 ZNF717Q9BY31 904 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 NDRG2Q9UN36 371 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 HEBP2Q9Y5Z4 205 aa16.5■□□□□ 0.23
RABGGTA-201ENST00000216840 LRP4O75096 1905 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 C10orf142B7Z368 130 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 PRICKLE3O43900 615 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 KCNK5O95279 499 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 EML2O95834 649 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 AK4P27144 223 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 RPL3P39023 403 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 CHN2P52757 468 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 LRRC74AQ0VAA2 488 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 TMTC4Q5T4D3 741 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 ABRAXAS1Q6UWZ7 409 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 RD3Q7Z3Z2 195 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 CNBD2Q96M20 576 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 UBE2ZQ9H832 354 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 TPT1P8Q9HAU6 139 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 ATAD3AQ9NVI7 634 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 USP36Q9P275 1121 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 PNMA8BQ9ULN7 279 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 PCDHGB4Q9UN71 923 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 PCDHGB5Q9Y5G0 923 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 GMEB1Q9Y692 573 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 DPPA5A6NC42 116 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 CLOCKO15516 846 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 OR1F1O43749 312 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 LCMT2O60294 686 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 PRKD3O94806 890 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 RASAL1O95294 804 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 SEMA4FO95754 770 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 IL3P08700 152 aa16.49■□□□□ 0.23
RABGGTA-201ENST00000216840 HTR1BP28222 390 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms