RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SPIBQ01892 262 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 PRAMEF9Q5VWM5 478 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 MACC1Q6ZN28 852 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 RNF165Q6ZSG1 346 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 FAM124AQ86V42 546 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 NXPE1Q8N323 547 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 HTATIP2Q9BUP3 242 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 EXOSC4Q9NPD3 245 aaKnown RBP10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 PEX16Q9Y5Y5 336 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 TRPM7Q96QT4 1865 aa10.15□□□□□ -0.79
CX3CL1-201ENST00000006053 SCN10AQ9Y5Y9 1956 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CENPBD1B2RD01 187 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 H3BUI4 141 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 ARHGAP33O14559 1287 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 RGS5O15539 181 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 ADAM12O43184 909 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 ZW10O43264 779 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 TRBC1P01850 177 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 ACPPP15309 386 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 WEE1P30291 646 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 SPAM1P38567 509 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 RGS6P49758 472 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 SRSF11Q05519 484 aaKnown RBP10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CSTF3Q12996 717 aaKnown RBP10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 PPIGQ13427 754 aaKnown RBP eCLIP10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 MRPL58Q14197 206 aaKnown RBP10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 TAF12Q16514 161 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CHST9Q7L1S5 443 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CYP4Z2PQ8N1L4 340 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CSGALNACT1Q8TDX6 532 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 LINC01599Q8WXQ3 324 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 ASIC4Q96FT7 647 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 FERD3LQ96RJ6 166 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 COPS8Q99627 209 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 NIPSNAP1Q9BPW8 284 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 MOV10Q9HCE1 1003 aaKnown RBP10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 OGDHLQ9ULD0 1010 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 GABRQQ9UN88 632 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CHD5Q8TDI0 1954 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 ZNF840PA6NDX5 716 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 LOC110117498-PIK3R3F6TDL0 507 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 KIAA0513O60268 411 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 SCN2BO60939 215 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 EOMESO95936 686 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 SOX6P35712 828 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 UGT2B15P54855 530 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 OR2B6P58173 313 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 IRF8Q02556 426 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 PRKCDQ05655 676 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 CDH18Q13634 790 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 TSTQ16762 297 aaKnown RBP10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 C10orf62Q5T681 223 aaPredicted RBP10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 RFLNAQ6ZTI6 216 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 TAS1R1Q7RTX1 841 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 LRRC70Q7Z2Q7 622 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 GPR26Q8NDV2 337 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 TOR1AIP2Q8NFQ8 470 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 WFDC5Q8TCV5 224 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 COL21A1Q96P44 957 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 EPYCQ99645 322 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 DUSP26Q9BV47 211 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 EMILIN2Q9BXX0 1053 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 MS4A12Q9NXJ0 267 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 SH3BP4Q9P0V3 963 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 SLC6A14Q9UN76 642 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 LYVE1Q9Y5Y7 322 aa10.14□□□□□ -0.79
CX3CL1-201ENST00000006053 KCNE1BA0A087WTH5 132 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 AOAHP28039 575 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 CRATP43155 626 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 FLT3LGP49771 235 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 P2RX3P56373 397 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 MRPS15P82914 257 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 ACSM2AQ08AH3 577 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 MTAPQ13126 283 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 IQCCQ4KMZ1 466 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 ACSM2BQ68CK6 577 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 FUT10Q6P4F1 479 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 VRK3Q8IV63 474 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 LGI4Q8N135 537 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 NAGSQ8N159 534 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 OR9Q2Q8NGE9 314 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 DMRTB1Q96MA1 342 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 OR5M11Q96RB7 305 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 CDK5RAP1Q96SZ6 601 aaKnown RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 CCM2Q9BSQ5 444 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 GABARAPL3Q9BY60 117 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 DNAJC11Q9NVH1 559 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 MBD1Q9UIS9 605 aaPredicted RBP10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 ZNF221Q9UK13 617 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 MYO7AQ13402 2215 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 C2orf78A6NCI8 922 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 POU1F1P28069 291 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 NSG1P42857 185 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 CRYBA2P53672 197 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 GNG2P59768 71 aa10.13□□□□□ -0.79
CX3CL1-201ENST00000006053 HKDC1Q2TB90 917 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms